Re: Emacs 24 can't find org library

[Ken Brown]

On 10/22/2012 5:42 PM, Kete Foy wrote:

Thanks, I will try those if necessary. I imagine it will be necessary if Emacs
ships with an old (7.8) version of Org-mode. That's why it doesn't make sense
that Ken had success with exporting an org file


I think that indicates that your problems don't have anything to do with 
the Org-mode version.



I was too lazy to clarify that Debian provides 7.9.1, but the important thing
is that 7.9 is available and provides the library that Emacs lacks. That's all


What library is it that you think Emacs lacks?  Did you try installing 
emacs-el as I suggested in one of my messages of October 21?


Ken


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Re: Emacs 24 can't find org library

[Kete Foy]

On Tuesday, October 23, 2012 09:12:48 AM Ken Brown wrote:
> Did you try installing
> emacs-el as I suggested in one of my messages of October 21?

Not yet, but I will try that first when I get back to the Windows computer.

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real beginer

[Trixie]

I'm real beginner with cygwin, actually linux and everything related.
But i need to instal and use certain fortran based program. I installed
cygwin and several packages. I'm trying to call certain module and all i get
is 
bash: module: command not found
I googled it up and i found the solution that i should call
/etc/profile.d/modules.sh before my module. but there is now module.sh in my
/profile.d folder! Did i miss some package to install? What should i do?
Please help! I desperately need to start that program :(((



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Re: real beginer

[Earnie Boyd]

On Tue, Oct 23, 2012 at 9:28 AM, Trixie  wrote:
> Please help! I desperately need to start that program :(((

What is the name of the program and where is it located?

> Documentation: http://cygwin.com/docs.html
Start here.

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Earnie
-- https://sites.google.com/site/earnieboyd

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Re: real beginer

[Brian Wilson]

Welcome to Cygwin Trixie.

If you visit the "Problems" link on the Cygwin home page 
(http://cygwin.com/problems.html) you will see that there are some things 
you can do to help the community diagnose your issue.  Please run the 
cygcheck command and attach the output file (see the web page instructions) 
as a plain text file to your response.  This will let the community see what 
is installed and if you are missing anything.

Sincerely,

Brian S. Wilson

> I'm real beginner with cygwin, actually linux and everything related.
> But i need to instal and use certain fortran based program. I installed
> cygwin and several packages. I'm trying to call certain module and 
> all i get is bash: module: command not found I googled it up and i 
> found the solution that i should call /etc/profile.d/modules.sh 
> before my module. but there is now module.sh in my /profile.d 
> folder! Did i miss some package to install? What should i do? Please 
> help! I desperately need to start that program :(((


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Re: real beginer

[Eliot Moss]

On 10/23/2012 9:28 AM, Trixie wrote:

I'm real beginner with cygwin, actually linux and everything related.
But i need to instal and use certain fortran based program. I installed
cygwin and several packages. I'm trying to call certain module and all i get
is
bash: module: command not found
I googled it up and i found the solution that i should call
/etc/profile.d/modules.sh before my module. but there is now module.sh in my
/profile.d folder! Did i miss some package to install? What should i do?
Please help! I desperately need to start that program :(((


Dear Trixie:

cygwin does not magically bring all of Linux to the Windows environment.
Rather, it provides a library of Linux (posix, actually) calls that
allows many Linux programs to be re-built to run under Windows, including
bash (and other shells).  I do not see the module program as being
available as a regular cygwin package.  There is also a collection
of packages called cygport (more things ported to run under cygwin),
and I don't see it there either.  So it would appear that it has not
been ported.

However, it is generally something used with another program, the one
you really want to use, to help in setting up environment variables
such as your path.  So ... what is the program you really want to run?
We can see whether THAT program is available at all under cygwin.

It may or may not be difficult to port the module package to cygwin;
someone would have to try.  Many programs port, but not every aspect
of Linux appears in cygwin, so not everything ports, and the level of
effort needed varies.

Regards -- Eliot Moss


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Re: real beginer

[Trixie]

Thanks! This is really fast reply :) I feel already welcome here.
Ok i ran cygcheck and this is result. I hope i understood how to send you a
file.
Program i need to use is   BigDFT    

cygwinhelpneeded.txt
  



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Re: real beginer

[Christopher Faylor]

On Tue, Oct 23, 2012 at 06:53:46AM -0700, Trixie wrote:
>Thanks! This is really fast reply :) I feel already welcome here.
>Ok i ran cygcheck and this is result. I hope i understood how to send you a
>file.
>Program i need to use is   BigDFT    

It seems like you're putting the cart before the horse here.

If you're having problems running BigDFT you should be checking with them
first.  If they need Cygwin to run, then they should have some sort of
setup instructions.

>cygwinhelpneeded.txt
>  

That is not the output requested at http://cygwin.com/problems.html .  You
need to follow the instructions there exactly.  But, first, check with the
site which provides the software that you're trying to run.

cgf

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Re: real beginer

[Andrew DeFaria]

On 10/23/2012 06:28 AM, Trixie wrote:

I'm real beginner with cygwin, actually linux and everything related.
But i need to instal and use certain fortran based program. I installed
cygwin and several packages. I'm trying to call certain module and all i get
is
bash: module: command not found
What is "module"? What's it supposed to be? Where did you get it? Where 
did you install it to?


Execution of scripts/binaries in Cygwin is not very much unlike 
execution of such commands in Windows cmd. The command name is searched 
for using the PATH environment variable. The difference really is 
Windows paths vs POSIX paths. That said, what do you see when you do 
"echo $PATH" in your bash shell?

I googled it up and i found the solution that i should call
/etc/profile.d/modules.sh before my module. but there is now module.sh in my
/profile.d folder! Did i miss some package to install? What should i do?
Please help! I desperately need to start that program :(((
Later on you mention that "that program" is "BigDFT 
". This appears to be a package 
distributed in source form. So now you have get it and build it. The 
build instructions mention nothing about Cygwin at all. So, effectively, 
you're talking about porting this program to Windows in the Cygwin 
environment. This is a very ambitious project for somebody who 
admittedly is a real beginner with Cygwin and Linux and everything 
related. Not impossible but a very, very big thing.  The install 
instructions talk about Fortran (so you'll need to install Fortran on 
Cygwin if you plan to go further) and using Intel's Fortran compiler as 
well as a C compiler. This is not a task for beginners unless they are 
tenacious in their goal of getting this done.


I would highly recommend you contact the developers of BigDFT and ask if 
they have considered porting it to Cygwin.

--
Andrew DeFaria 
And whose cruel idea was it to put an S in the word Lisp?


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Re: real beginer

[Trixie]

Thank you all.
Here's my story. I'm physics student and my master degree work is
"Application of GPU on DFT calculations". I need this BigDFT to run certain
examples on cuda based GPU computer and on regular CPU and discuss the
results. 
Cygwin was my first choice because i felt comfortable using it. But I think
this is gonna be harder then i expected. I guees i should give up Cygwin and
instal (maybe) UBUNTU on partition of my computer and try there. Any
suggestion there?
Thank you all again, you've been most kind.



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Re: real beginer

[Christopher Faylor]

On Tue, Oct 23, 2012 at 07:31:41AM -0700, Trixie wrote:
>Thank you all.
>Here's my story. I'm physics student and my master degree work is
>"Application of GPU on DFT calculations". I need this BigDFT to run certain
>examples on cuda based GPU computer and on regular CPU and discuss the
>results. 
>Cygwin was my first choice because i felt comfortable using it. But I think
>this is gonna be harder then i expected. I guees i should give up Cygwin and
>instal (maybe) UBUNTU on partition of my computer and try there. Any
>suggestion there?

If this is a linux-based package then you should, again, check with the
original web site for recommendations.  Any modern Linux is likely to be
ok but we can't advise you about Linux here.  That isn't something that
we do in this mailing list.

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Re: real beginer

[Bill Meier]

On 10/23/2012 10:19 AM, Andrew DeFaria wrote:

On 10/23/2012 06:28 AM, Trixie wrote:

I'm real beginner with cygwin, actually linux and everything related.
But i need to instal and use certain fortran based program. I installed
cygwin and several packages. I'm trying to call certain module and all



Later on you mention that "that program" is "BigDFT
". This appears to be a package
distributed in source form. So now you have get it and build it. The
build instructions mention nothing about Cygwin at all.

I would highly recommend you contact the developers of BigDFT and ask if
they have considered porting it to Cygwin.


I agree with the previous poster.

Phrases like "massively parallel electronic structure code" and etc 
suggest this is a large complex package probably making intensive use of 
*nix functionality.


I suspect strongly doing a port would be a *big* project.

My 2c:

You'd probably be *far* better off getting access to a Linux system.

If you absolutely must use Windows, running the program on a Linux 
virtual machine under Windows might work, but I would suspect that the 
program may very well require "serious" hardware and might not run 
effectively on a virtual machine.


As noted previously, the build process looks a bit complex so I'd also 
suggest finding someone with Linux lnowledge to build and install the 
system.



Bill Meier

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Re: real beginer

[Eliot Moss]

On 10/23/2012 10:31 AM, Trixie wrote:

Thank you all.
Here's my story. I'm physics student and my master degree work is
"Application of GPU on DFT calculations". I need this BigDFT to run certain
examples on cuda based GPU computer and on regular CPU and discuss the
results.
Cygwin was my first choice because i felt comfortable using it. But I think
this is gonna be harder then i expected. I guees i should give up Cygwin and
instal (maybe) UBUNTU on partition of my computer and try there. Any
suggestion there?
Thank you all again, you've been most kind.


I am most of the way through building bigdft under cygwin.  I have
no idea how the GPU aspect might work but here is what I've done
so far:

1) Download blas.tgz to ~/downloads (where I put things)
   In ~/tools (because I like it):
   tar xzvf ~/downloads/blas.tgz
   In ~/tools/BLAS:
   Edit make.inc as desired
   make
   cp blas_LINUX.a /usr/lib/libblas.a

2) Download lapack-3.4.2.tgz to ~/downloads
   In ~/tools, tar xzvf ~/downloads/lapack-3.4.2.tgz
   In ~/tools/lapack-3.4.2:
   cp make.inc.example make.inc
   Edit make.inc as desired; note that libblas.a is in /usr/lib, so
 you *must* edit that line
   make  [takes a LONG time]
   cp *.a /usr/lib

3) Download bigdft-1.6.0.tar.gz to ~/downloads
   In ~/tools, gunzip -c ~/downloads/bigdft-1.6.0.tar.gz | tar xvf -
   In ~/tools/bigdft-1.6.0:
   ./configure  (takes a while)
   make (takes quite a while)

This ultimately failed when linking, so something seems missing or
slightly off. I will try to look at it later.

On the other hand, setting up a Linux partition, or using
a Linux virtual machine under Windows, are reasonable options too.

Eliot Moss


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Re: real beginer

[marco atzeri]

On 10/23/2012 6:35 PM, Eliot Moss wrote:

On 10/23/2012 10:31 AM, Trixie wrote:

Thank you all.
Here's my story. I'm physics student and my master degree work is
"Application of GPU on DFT calculations". I need this BigDFT to run
certain
examples on cuda based GPU computer and on regular CPU and discuss the
results.
Cygwin was my first choice because i felt comfortable using it. But I
think
this is gonna be harder then i expected. I guees i should give up
Cygwin and
instal (maybe) UBUNTU on partition of my computer and try there. Any
suggestion there?
Thank you all again, you've been most kind.


I am most of the way through building bigdft under cygwin.  I have
no idea how the GPU aspect might work but here is what I've done
so far:

1) Download blas.tgz to ~/downloads (where I put things)
In ~/tools (because I like it):
tar xzvf ~/downloads/blas.tgz
In ~/tools/BLAS:
Edit make.inc as desired
make
cp blas_LINUX.a /usr/lib/libblas.a

2) Download lapack-3.4.2.tgz to ~/downloads
In ~/tools, tar xzvf ~/downloads/lapack-3.4.2.tgz
In ~/tools/lapack-3.4.2:
cp make.inc.example make.inc
Edit make.inc as desired; note that libblas.a is in /usr/lib, so
  you *must* edit that line
make  [takes a LONG time]
cp *.a /usr/lib


1 & 2 are already available on liblapack-devel

$ cygcheck -l liblapack-devel |grep "\.a"
/usr/lib/libblas.a
/usr/lib/libblas.dll.a
/usr/lib/liblapack.a
/usr/lib/liblapack.dll.a
/usr/lib/libtmglib.a




3) Download bigdft-1.6.0.tar.gz to ~/downloads
In ~/tools, gunzip -c ~/downloads/bigdft-1.6.0.tar.gz | tar xvf -
In ~/tools/bigdft-1.6.0:
./configure  (takes a while)
make (takes quite a while)

This ultimately failed when linking, so something seems missing or
slightly off. I will try to look at it later.

On the other hand, setting up a Linux partition, or using
a Linux virtual machine under Windows, are reasonable options too.

Eliot Moss





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Re: real beginer

[Sven Köhler]

Am 23.10.2012 15:28, schrieb Trixie:
> I'm real beginner with cygwin, actually linux and everything related.
> But i need to instal and use certain fortran based program. I installed
> cygwin and several packages. I'm trying to call certain module and all i get
> is 
> bash: module: command not found

I googled a bit about fortran, and it seems that "module" is a fortran
command. Note, that what you see when you open a cygwin window, is a
command shell (bash in this case), which allows you to execute certain
programs. It does not understand fortran commands.

I believe, you will have to install gcc's fortran compiler. Then you may
be able to compile and run fortran program. However, I'm not familiar
with that.

> I googled it up and i found the solution that i should call
> /etc/profile.d/modules.sh before my module. but there is now module.sh in my
> /profile.d folder! Did i miss some package to install? What should i do?
> Please help! I desperately need to start that program :(((

I'm sorry, but /etc/profile.d/modules.sh is totally unrelated to your
problem.

I strongly suggest, that you search for somebody that has experience
with Linux and fortran. Ask you supervisor if necessary. I assume, this
is work for you master thesis?

Eliot is trying to guide you through the process of building BigDFT. If
that works for you, that's fine. Then again, you should make sure that
BigDFT accesses the GPU it the most direct way possible, i.e. that it
doesn't have to pass the information through several layer of emulation.
With cygwin, there's a fair chance of that being the case.
I presume, you will do sort of benchmarking?


Regards,
  Sven


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Re: real beginer

[Andrew DeFaria]

On 10/23/2012 9:35 AM, Eliot Moss wrote:

On 10/23/2012 10:31 AM, Trixie wrote:

Thank you all.
Here's my story. I'm physics student and my master degree work is
"Application of GPU on DFT calculations". I need this BigDFT to run 
certain

examples on cuda based GPU computer and on regular CPU and discuss the
results.
Cygwin was my first choice because i felt comfortable using it. But I 
think
this is gonna be harder then i expected. I guees i should give up 
Cygwin and

instal (maybe) UBUNTU on partition of my computer and try there. Any
suggestion there?
Thank you all again, you've been most kind.


I am most of the way through building bigdft under cygwin.  I have
no idea how the GPU aspect might work but here is what I've done
so far:

1) Download blas.tgz to ~/downloads (where I put things)
   In ~/tools (because I like it):
   tar xzvf ~/downloads/blas.tgz
   In ~/tools/BLAS:
   Edit make.inc as desired
   make
   cp blas_LINUX.a /usr/lib/libblas.a

2) Download lapack-3.4.2.tgz to ~/downloads
   In ~/tools, tar xzvf ~/downloads/lapack-3.4.2.tgz
   In ~/tools/lapack-3.4.2:
   cp make.inc.example make.inc
   Edit make.inc as desired; note that libblas.a is in /usr/lib, so
 you *must* edit that line
   make  [takes a LONG time]
   cp *.a /usr/lib

To run on Windows, shouldn't this .a files really be .dll's?


3) Download bigdft-1.6.0.tar.gz to ~/downloads
   In ~/tools, gunzip -c ~/downloads/bigdft-1.6.0.tar.gz | tar xvf -
   In ~/tools/bigdft-1.6.0:
   ./configure  (takes a while)
   make (takes quite a while)

This ultimately failed when linking, so something seems missing or
slightly off. I will try to look at it later.

On the other hand, setting up a Linux partition, or using
a Linux virtual machine under Windows, are reasonable options too.
If you're using Cygwin's gcc/fortran and linker I suspect you'll need 
.dll's not .a's.

--
Andrew DeFaria 
Madness takes its toll. Please have exact change.


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[ANNOUNCEMENT] New package: apngtools 1.0-1 -- Animated PNG image (APNG) tools

[Jari Aalto]

PACKAGE DESCRIPTION
===

This is a Cygwin metapackage to install collection of utilities for
handling animated PNGs: apng2gif apngasm apngdis apngopt gif2apng

No "apngtools" itself exists as a standalone project.

CHANGES SINCE LAST RELEASE
==

None.

INSTALL OR UPGRADE NOTES


Standard install.

CYGWIN INSTALLATION INFORMATION
===

To install this package, click on the "Install Cygwin now" link on the
 web page. This downloads setup.exe to your
system. Then, run setup and answer all of the questions. You'll find
the package listed in the "All" category. After installation, read the
documentation at directories:

/usr/share/doc//*
/usr/share/doc/Cygwin/.README

If you have questions or comments, please send them to the Cygwin
mailing list at .

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Re: real beginer

[Trixie]

I have liblapack-devel instaled and did ./configure and make . It took some
time but it finished. Problem happened when i tried to do this  tutotial
   . It says
-bash: bigdft: command not found
 I read somethere i shoud first do module load bigdft, but when I do that,
there is that module: command not found. 
Currently I'm not using gpu (there is option to load cuda configure
--enable-cuda-gpu) I'm just trying to make sure this thing works at all. 



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Re: real beginer

[Andrew DeFaria]

On 10/23/2012 12:46 PM, Trixie wrote:

I have liblapack-devel instaled and did ./configure and make . It took some
time but it finished.
Did make finish successfully, returning a 0 status? Did you have a 
bigdft.exe file? If you type "ls bigdft" do you see an executable? 
(Note: The file's name is actually bigdft.exe but ls will list it as 
bigdft).

  Problem happened when i tried to do this  tutotial
   . It says
-bash: bigdft: command not found
The tutorial shows you doing an ls and it listing out two files: bigdft 
and posinp.xyz. Did you see those files? Cause your supposed to do that 
*before* you type in "./bigdft | tee N2.out". And you did include "./" 
before "bigdft" right?

I read somethere i shoud first do module load bigdft, but when I do that,
there is that module: command not found.
Module is not a command - period. The tutorial you pointed us to does 
not say you need to first do "module load bigdft" - in fact the word 
"module" does not appear on that page - so what lead you to believe you 
should first use a non-existent module command?

Currently I'm not using gpu (there is option to load cuda configure
--enable-cuda-gpu) I'm just trying to make sure this thing works at all.

--
Andrew DeFaria 
I got a new shadow. I had to get rid of the other one -- it wasn't doing 
what I was doing.



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Re: real beginer

[Trixie]

On 10/23/2012 12:46 PM, Trixie wrote:
>> I have liblapack-devel instaled and did ./configure and make . It took
>> some
>> time but it finished.
>Did make finish successfully, returning a 0 status? Did you have a 
>bigdft.exe file? If you type "ls bigdft" do you see an executable? 
>(Note: The file's name is actually bigdft.exe but ls will list it as 
>bigdft).

/i type ls bigdft and there's "No such file or directory" and i cant find
bigdft.exe file anywhere. That means install and make didnt finish well,
right?
posinp.xyz is there./

>   Problem happened when i tried to do this  tutotial
> ;   .
> It says
> -bash: bigdft: command not found
The tutorial shows you doing an ls and it listing out two files: bigdft 
and posinp.xyz. Did you see those files? Cause your supposed to do that 
*before* you type in "./bigdft | tee N2.out". And you did include "./" 
before "bigdft" right?
> I read somethere i shoud first do module load bigdft, but when I do that,
> there is that module: command not found.
Module is not a command - period. The tutorial you pointed us to does 
not say you need to first do "module load bigdft" - in fact the word 
>"module" does not appear on that page - so what lead you to believe you 
>should first use a non-existent module command?
/
I googled it somewhere, some instruction at some laboratory that used
BigDFT. I was getting really desperate. you can't blame girl for trying :)
/
> Currently I'm not using gpu (there is option to load cuda configure
> --enable-cuda-gpu) I'm just trying to make sure this thing works at all.
-- 
Andrew DeFaria ;
I got a new shadow. I had to get rid of the other one -- it wasn't doing 
what I was doing.

Sooo...as far as i understand now, something wrong was with install and make
and i didn't get bigdft.exe file. there is bigdft.pc in folder i compiled
but no .exe . You are returing me hope i can finish this in time!






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Re: real beginer

[Andrew DeFaria]

On 10/23/2012 2:46 PM, Trixie wrote:

On 10/23/2012 12:46 PM, Trixie wrote:

I have liblapack-devel instaled and did ./configure and make . It took
some
time but it finished.

Did make finish successfully, returning a 0 status? Did you have a
bigdft.exe file? If you type "ls bigdft" do you see an executable?
(Note: The file's name is actually bigdft.exe but ls will list it as
bigdft).

/i type ls bigdft and there's "No such file or directory" and i cant find
bigdft.exe file anywhere. That means install and make didnt finish well,
right?

Probably. You could do something like: make; echo "Status from make was $?"

The $? is the return status from the previous command. That will only 
tell you if the make turned 0 for success. The output of make would be 
much more instructive.

posinp.xyz is there./

AFAICT posinp.xyz is not produced from the make.

You really should approach the people who maintain this package and ask 
them about it. This package is not Cygwin.

--
Andrew DeFaria 
By the time you make ends meet, they move the ends.


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termios VTIME and VMIN prevent SIGALRM from interrupting read

[J. L. Sloan]

If I use termios(3) to set VTIME and VMIN to values greater than zero for
a serial port, I can no longer interrupt a read(2) against the descriptor
with SIGALRM. Replacing read(2) with nanosleep(2) yields EINTR as
expected. Not setting VTIME and VMIN, read(2) yields EINTR as desired.
Test program and cygcheck output attached. Could be this is intended
behavior. It seems more likely that this is a bug in the driver for my
USB-to-serial adapter. Cygwin 1.7.17 snapshot 2012-10-16.

-- 
J. L. Sloan  Digital Aggregates Corp.
+1 303 940 9064 (O)  3440 Youngfield St. #209
+1 303 489 5178 (M)  Wheat Ridge CO 80033 USA
jsl...@diag.com  http://www.diag.com

unittest_cygwin_sigalrm.c
Description: Binary data

Cygwin Configuration Diagnostics
Current System Time: Tue Oct 23 17:07:37 2012

Windows 7 Professional N Ver 6.1 Build 7601 Service Pack 1

Running under WOW64 on AMD64

Path:   C:\cygwin\usr\local\bin
C:\cygwin\bin
C:\Windows\system32
C:\Windows
C:\Windows\System32\Wbem
C:\Windows\System32\WindowsPowerShell\v1.0
C:\Program Files (x86)\Google\Google Apps Migration
C:\Program Files (x86)\Microchip\MPLAB C32 Suite\bin
C:\Program Files (x86)\Git\cmd
C:\Program Files (x86)\QuickTime\QTSystem
C:\Program Files\Microsoft Windows Performance Toolkit

Output from C:\cygwin\bin\id.exe
UID: 1001(jsloan) GID: 513(None)
513(None) 545(Users)

SysDir: C:\Windows\system32
WinDir: C:\Windows

USER = 'jsloan'
PWD = '/home/jsloan'
HOME = '/home/jsloan'

HOMEPATH = '\Users\jsloan'
MANPATH = '/usr/local/man:/usr/share/man:/usr/man:'
APPDATA = 'C:\Users\jsloan\AppData\Roaming'
ProgramW6432 = 'C:\Program Files'
HOSTNAME = 'MP180-E6510'
SHELL = '/bin/bash'
TERM = 'xterm'
PROCESSOR_IDENTIFIER = 'Intel64 Family 6 Model 37 Stepping 2, GenuineIntel'
WINDIR = 'C:\Windows'
PUBLIC = 'C:\Users\Public'
OLDPWD = '/cygdrive/c/cygwin/bin'
USERDOMAIN = 'MP180-E6510'
CommonProgramFiles(x86) = 'C:\Program Files (x86)\Common Files'
OS = 'Windows_NT'
ALLUSERSPROFILE = 'C:\ProgramData'
!:: = '::\'
temp = 'C:\Users\jsloan\AppData\Local\Temp'
COMMONPROGRAMFILES = 'C:\Program Files (x86)\Common Files'
TMP = '/tmp'
QTJAVA = 'C:\Program Files (x86)\Java\jre7\lib\ext\QTJava.zip'
USERNAME = 'jsloan'
PROCESSOR_LEVEL = '6'
ProgramFiles(x86) = 'C:\Program Files (x86)'
PSModulePath = 'C:\Windows\system32\WindowsPowerShell\v1.0\Modules\'
SHELLOPTS = 
'braceexpand:emacs:hashall:histexpand:history:igncr:interactive-comments:monitor'
FP_NO_HOST_CHECK = 'NO'
SYSTEMDRIVE = 'C:'
PROCESSOR_ARCHITEW6432 = 'AMD64'
JAVA_HOME = 'C:\Program Files\Java\jre7'
LANG = 'en_US.UTF-8'
USERPROFILE = 'C:\Users\jsloan'
TZ = 'America/Denver'
PS1 = '\[\e]0;\w\a\]\n\[\e[32m\]\u@\h \[\e[33m\]\w\[\e[0m\]\n\$ '
LOGONSERVER = '\\MP180-E6510'
CommonProgramW6432 = 'C:\Program Files\Common Files'
PROCESSOR_ARCHITECTURE = 'x86'
LOCALAPPDATA = 'C:\Users\jsloan\AppData\Local'
ProgramData = 'C:\ProgramData'
SHLVL = '1'
PATHEXT = '.COM;.EXE;.BAT;.CMD;.VBS;.VBE;.JS;.JSE;.WSF;.WSH;.MSC'
HOMEDRIVE = 'C:'
COMSPEC = 'C:\Windows\system32\cmd.exe'
SYSTEMROOT = 'C:\Windows'
PRINTER = 'North HP LaserJet 4250 PCL6'
PROCESSOR_REVISION = '2502'
CLASSPATH = '.;C:\Program Files (x86)\Java\jre7\lib\ext\QTJava.zip'
INFOPATH = '/usr/local/info:/usr/share/info:/usr/info:'
PROGRAMFILES = 'C:\Program Files (x86)'
NUMBER_OF_PROCESSORS = '4'
SESSIONNAME = 'Console'
COMPUTERNAME = 'MP180-E6510'
_ = '/usr/bin/cygcheck'

HKEY_CURRENT_USER\Software\Cygwin
HKEY_CURRENT_USER\Software\Cygwin\Installations
  (default) = '\??\C:\cygwin'
HKEY_CURRENT_USER\Software\Cygwin\Program Options
HKEY_CURRENT_USER\Software\Cygwin\setup
HKEY_LOCAL_MACHINE\SOFTWARE\Cygwin
HKEY_LOCAL_MACHINE\SOFTWARE\Cygwin\Installations
  (default) = '\??\C:\cygwin'
HKEY_LOCAL_MACHINE\SOFTWARE\Cygwin\Program Options
HKEY_LOCAL_MACHINE\SOFTWARE\Cygwin\setup
  (default) = 'C:\cygwin'

obcaseinsensitive set to 1

Cygwin installations found in the registry:
  System: Key: c5e39b7a9d22bafb Path: C:\cygwin
  User:   Key: c5e39b7a9d22bafb Path: C:\cygwin

c:  hd  NTFS476837Mb  11% CP CS UN PA FC 
d:  cd N/AN/A

C:\cygwin/  system  binary,auto
C:\cygwin\bin/usr/bin   system  binary,auto
C:\cygwin\lib/usr/lib   system  binary,auto
cygdrive prefix  /cygdrive  userbinary,auto

Found: C:\cygwin\bin\awk
 -> C:\cygwin\bin\gawk.exe
Found: C:\cygwin\bin\bash.exe
Found: C:\cygwin\bin\cat.exe
Found: C:\cygwin\bin\cp.exe
Found: C:\cygwin\bin\cpp.exe
 -> C:\cygwin\etc\alternatives\cpp
 -> C:\cygwin\bin\cpp-3.exe
Not Found: crontab
Found: C:\cygwin\bin\find.exe
Found: C:\Windows\system32\find.exe
Warning: C:\cygwin\bin\find.exe hides C:\Windows\system32\find.exe
Found: C:\cygwin\bin\gcc.exe
 -> C:\cygwin\etc\alternatives\gcc
 -> C:\cygwin\bin\gcc-3.exe
Not Found: gdb
Found: C:\cygwin\bin\grep.exe
Found: C:\cygwin\bin\kill.exe
Found: C:\cygwin\bin\ld.exe
Found: C:\cygwin\bin\ls.exe
Found: C:\cygwin\bin\make.exe
Fo

Re: real beginer

[Trixie]

>>> I have liblapack-devel instaled and did ./configure and make . It took
>>> some
>>> time but it finished.
>> Did make finish successfully, returning a 0 status? Did you have a
> >> bigdft.exe file? If you type "ls bigdft" do you see an executable?
> >> (Note: The file's name is actually bigdft.exe but ls will list it as
> >> bigdft).
> > /i type ls bigdft and there's "No such file or directory" and i cant
> find
> > bigdft.exe file anywhere. That means install and make didnt finish well,
> > right?
> Probably. You could do something like: make; echo "Status from make was
> $?"

> The $? is the return status from the previous command. That will only 
> tell you if the make turned 0 for success. The output of make would be 
> much more instructive.

Nope, it didnt turned 0. it is 2. Status from make was 2.


> You really should approach the people who maintain this package and ask 
> them about it. This package is not Cygwin.

Yes i see that now. Unfortunately i lost two weeks with this. Well, my next
step is to contact someone in charge of BigDFT and ask for help.




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Re: Cygcheck says w3m 0.5.3-1 package incomplete, file type mismatch messages

[Bob Heckel]

On Tue, Oct 23, 2012 at 6:18 PM, Keith Christian wrote:
>
> w3m works, but appears to run slowly after the last update.  While
> comparing the output of "cygcheck -s -r -v" I noticed some
> differences.

Sorry you're having trouble.  Strange, I did benchmarking in
development and found 0.5.3 slightly faster than 0.5.2

> Line 24 below shows Incomplete.

I'm not sure what's causing that, I show "OK" on my installations.

> I re-ran setup.exe, removed w3m, then re-installed from the same
> mirror, no change.

Did you have 0.5.2 installed previously?

> Is this output satisfactory, or is there a corrective action for this
> package post-install?

I can't replicate it currently, I'll look into it further over the
next few days and report back or up-version if I see anything wrong or
fixable.

If anyone else is experiencing w3m-0.5.3-1 trouble, that would be good to know.

Bob

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Unlimited Talk Text and Internet That Pays You Back

[George]

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Re: real beginer

[Eliot Moss]

On 10/23/2012 6:35 PM, Trixie wrote:



I have liblapack-devel instaled and did ./configure and make . It took
some
time but it finished.

Did make finish successfully, returning a 0 status? Did you have a

bigdft.exe file? If you type "ls bigdft" do you see an executable?
(Note: The file's name is actually bigdft.exe but ls will list it as
bigdft).

/i type ls bigdft and there's "No such file or directory" and i cant

find

bigdft.exe file anywhere. That means install and make didnt finish well,
right?

Probably. You could do something like: make; echo "Status from make was
$?"


Ok, so here is one thing I have found out.

This package has init/locreg.f90 in one directory
and linear/locReg.f90 in another.  It places the .o
in the *same* directory.  The underlying Windows
file system does not support locreg.o and locReg.o
(names that differ in upper vs. lower case only)
in the same directory.  I am trying renaming one
of the files and manually changing the makefile
to see if it will build with suitable resolved
names.  But this is probably what happened to you,
and should be referred upstream to the purveyors
of the package.  It's an 'evil' thing to do because
it is not portable to platforms such as this and
tends to be confusing even on platforms where it
works ...

More once I see if where this change gets me ...

Eliot Moss

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Re: Cygcheck says w3m 0.5.3-1 package incomplete, file type mismatch messages

[Robert Pendell]

On Tue, Oct 23, 2012 at 7:07 PM, Bob Heckel wrote:
> On Tue, Oct 23, 2012 at 6:18 PM, Keith Christian wrote:
>>
>> w3m works, but appears to run slowly after the last update.  While
>> comparing the output of "cygcheck -s -r -v" I noticed some
>> differences.
>
> Sorry you're having trouble.  Strange, I did benchmarking in
> development and found 0.5.3 slightly faster than 0.5.2
>
>> Line 24 below shows Incomplete.
>
> I'm not sure what's causing that, I show "OK" on my installations.
>
>> I re-ran setup.exe, removed w3m, then re-installed from the same
>> mirror, no change.
>
> Did you have 0.5.2 installed previously?
>
>> Is this output satisfactory, or is there a corrective action for this
>> package post-install?
>
> I can't replicate it currently, I'll look into it further over the
> next few days and report back or up-version if I see anything wrong or
> fixable.
>
> If anyone else is experiencing w3m-0.5.3-1 trouble, that would be good to 
> know.
>
> Bob
>

(this is a resend with a little bit of not so relevant information
stripped, last message got blocked due to exceeding spam score
somehow)

I can confirm the issue with the w3m package.  I have a local sync job
that keeps a local copy of the repository (nice to install a package
offline when I'm not on) and it is synced up the kernel.org server.  I
got the same error on a fresh install and I never had w3m installed
prior.  I didn't check speed though.

$ cygcheck -cv w3m
Cygwin Package Information
Last downloaded files to: D:\cygwin\home\shinji\cygwin
Last downloaded files from: [snipped as it is incorrect]

Package  VersionStatus
File type mismatch: /usr from package w3m
File type mismatch: /usr/bin from package w3m
File type mismatch: /usr/lib from package w3m
File type mismatch: /usr/lib/w3m from package w3m
File type mismatch: /usr/lib/w3m/cgi-bin from package w3m
File type mismatch: /usr/share from package w3m
File type mismatch: /usr/share/doc from package w3m
File type mismatch: /usr/share/doc/w3m from package w3m
File type mismatch: /usr/share/doc/Cygwin from package w3m
File type mismatch: /usr/share/locale from package w3m
File type mismatch: /usr/share/locale/ja from package w3m
File type mismatch: /usr/share/locale/ja/LC_MESSAGES from package w3m
File type mismatch: /usr/share/man from package w3m
File type mismatch: /usr/share/man/ja from package w3m
File type mismatch: /usr/share/man/ja/man1 from package w3m
File type mismatch: /usr/share/man/man1 from package w3m
File type mismatch: /usr/share/w3m from package w3m
w3m  0.5.3-1Incomplete

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ISC DHCPv6 Server?

[Gary Johnson]

Has anyone built the ISC DHCPv6 server on Cygwin?

I downloaded the latest source, dhcp-4.2.4-P2, saw that it contained
some checks for __CYGWIN__ and __CYGWIN32__ and tried "./configure"
and "make" but make failed with the following.

make[2]: Entering directory 
`/usr/local/src/dhcp-4.2.4-P2/dhcp-4.2.4-P2/common'
gcc -DHAVE_CONFIG_H -I. -I../includes  -I.. -DLOCALSTATEDIR='"/var"'-g 
-O2  -Wall -Werror -fno-strict-aliasing -I../bind/include -MT alloc.o -MD -MP 
-MF .deps/alloc.Tpo -c -o alloc.o alloc.c
In file included from alloc.c:35:
../includes/dhcpd.h:63:23: net/route.h: No such file or directory
../includes/dhcpd.h:64:24: net/if_arp.h: No such file or directory
In file included from ../includes/dhcpd.h:105,
 from alloc.c:35:
../includes/omapip/omapip_p.h:48:1: "fd_set" redefined
In file included from ../includes/dhcpd.h:48,
 from alloc.c:35:
/usr/include/sys/types.h:238:1: this is the location of the previous 
definition
Makefile:264: recipe for target `alloc.o' failed
make[2]: *** [alloc.o] Error 1
make[2]: Leaving directory 
`/usr/local/src/dhcp-4.2.4-P2/dhcp-4.2.4-P2/common'
Makefile:329: recipe for target `all-recursive' failed
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory 
`/usr/local/src/dhcp-4.2.4-P2/dhcp-4.2.4-P2/common'
Makefile:246: recipe for target `all-recursive' failed
make: *** [all-recursive] Error 1

It is the end of the day so I have not yet investigated those
errors.  I was hoping more to find someone here who had already done
this than to get help with the make process.  For now.

Before downloading the ISC source, I searched the web to see if
anyone had built this on Cygwin, but the latest work I could find
was a patch to dhcp-3.0.1rc11, which does not support DHCPv6.

Regards,
Gary


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