[Freesurfer] Potential bias in the base template

2023-09-26 Thread Maksim Slivka
External Email - Use Caution Hi FreeSurfer Community, I plan to use longitudinal FreeSurfer to process a set of longitudinal scans that are likely to create a bias in the base template. Specifically, our study consists of 3 scans acquired within the first 20 weeks and a subseque

[Freesurfer] T1map processing error

2024-01-17 Thread Maksim Slivka
found with norm > 40 -- check skull stripping I would like to ask if anyone here has experience in processing quantitative T1maps with FS? Did you also run into that error? Were you able to solve it? I am looking forward to hearing from you. Best regards, Maksim Slivka Head engineer Center