Denis,

try changing the size of your SWAPFILE.

I changed mine to 10G, which was not really needed.

Try 2 or 3G. 

regs, Kev

On Tuesday, 15 April 2025 at 00:03:25 UTC+10 denis...@gmail.com wrote:

> I have been installing Sage from source on three workstations and a laptop 
> for ages. The last release which went without a hitch was 10.3. I skipped 
> 10.4, but with 10.5 and 10.6 one of the workstations has a weird problem: 
> the build simply hangs and stays that way, for as long as I let it (two 
> days now). Below is the output of ps -xuwa | grep python and the tail of 
> the install log. The log is 97 MB, but there seems to be nothing there save 
> a few error messages from various packages which are the same as on the 
> other three machines where there were no problems.
>
> All four machines are Debian bookworm on amd64, fully up to date. The one 
> where the build fails is only different in that I installed all the 
> packages suggested by configure and did `make reconfigure' after that, as 
> recommended. I can imagine that could cause some conflict, but not such 
> silent failure of the build.
>
> Any suggestion?
>
> Thanks,
>
> Denis
>
> =========================================================================
> output of ps xuwa | grep python, showing lots of defunct processes
> =========================================================================
>
> myuserid  213668  0.0  0.0   2584   916 ?        S    Apr12   0:00 /bin/sh 
> /opt/Sage/sage-10.6/src/bin/sage-python 
> /opt/Sage/sage-10.6/src/bin/sage-cleaner
> myuserid  213669  0.0  0.0  17376 13008 ?        S    Apr12   0:01 python3 
> /opt/Sage/sage-10.6/src/bin/sage-cleaner
> myuserid  213932  0.0  0.0   3108  2444 ?        S    Apr12   0:00 make 
> doc-inventory--reference-spkg doc-inventory--reference-manifolds 
> doc-inventory--reference-algebras doc-inventory--reference-polynomial_rings 
> doc-inventory--reference-repl doc-inventory--reference-tensor_free_modules 
> doc-inventory--reference-combinat doc-inventory--reference-dynamics 
> doc-inventory--reference-plot3d doc-inventory--reference-arithgroup 
> doc-inventory--reference-graphs doc-inventory--reference-misc 
> doc-inventory--reference-parallel doc-inventory--reference-topology 
> doc-inventory--reference-arithmetic_curves 
> doc-inventory--reference-asymptotic doc-inventory--reference-calculus 
> doc-inventory--reference-categories doc-inventory--reference-coding 
> doc-inventory--reference-coercion doc-inventory--reference-constants 
> doc-inventory--reference-cpython doc-inventory--reference-cryptography 
> doc-inventory--reference-curves doc-inventory--reference-data_structures 
> doc-inventory--reference-databases 
> doc-inventory--reference-diophantine_approximation 
> doc-inventory--reference-discrete_geometry doc-inventory--reference-doctest 
> doc-inventory--reference-documentation 
> doc-inventory--reference-drinfeld_modules 
> doc-inventory--reference-euclidean_spaces 
> doc-inventory--reference-finite_rings 
> doc-inventory--reference-function_fields doc-inventory--reference-functions 
> doc-inventory--reference-game_theory doc-inventory--reference-games 
> doc-inventory--reference-groups doc-inventory--reference-hecke 
> doc-inventory--reference-history_and_license 
> doc-inventory--reference-homology 
> doc-inventory--reference-hyperbolic_geometry 
> doc-inventory--reference-interfaces doc-inventory--reference-knots 
> doc-inventory--reference-lfunctions doc-inventory--reference-libs 
> doc-inventory--reference-logic doc-inventory--reference-matrices 
> doc-inventory--reference-matroids doc-inventory--reference-modabvar 
> doc-inventory--reference-modfrm doc-inventory--reference-modsym 
> doc-inventory--reference-modules doc-inventory--reference-monoids 
> doc-inventory--reference-noncommutative_polynomial_rings 
> doc-inventory--reference-number_fields doc-inventory--reference-numerical 
> doc-inventory--reference-oremodules doc-inventory--reference-padics 
> doc-inventory--reference-plotting doc-inventory--reference-power_series 
> doc-inventory--reference-probability 
> doc-inventory--reference-quadratic_forms 
> doc-inventory--reference-quat_algebras doc-inventory--reference-quivers 
> doc-inventory--reference-resolutions 
> doc-inventory--reference-riemannian_geometry doc-inventory--reference-rings 
> doc-inventory--reference-rings_numerical 
> doc-inventory--reference-rings_standard doc-inventory--reference-sat 
> doc-inventory--reference-schemes doc-inventory--reference-semirings 
> doc-inventory--reference-sets doc-inventory--reference-stats 
> doc-inventory--reference-structure doc-inventory--reference-valuations
> myuserid  213939  0.0  0.0   2584   912 ?        S    Apr12   0:00 /bin/sh 
> /opt/Sage/sage-10.6/src/bin/sage-python -m sage_docbuild --no-pdf-links 
> reference/combinat inventory
> myuserid  214317  0.0  1.5 5934336 514660 ?      S    Apr12   0:03 python3 
> -m sage_docbuild --no-pdf-links reference/combinat inventory
> myuserid  239376  0.0  0.0      0     0 ?        Z    Apr12   0:00 
> [sage-python] <defunct>
> myuserid  242472  0.0  0.0   2584   928 ?        S    Apr12   0:00 /bin/sh 
> /opt/Sage/sage-10.6/src/bin/sage-python -m sage_docbuild --no-pdf-links 
> reference/topology inventory
> myuserid  242503  0.0  1.4 5896956 482552 ?      S    Apr12   0:02 python3 
> -m sage_docbuild --no-pdf-links reference/topology inventory
> myuserid  245156  0.0  0.0   2584   912 ?        S    Apr12   0:00 /bin/sh 
> /opt/Sage/sage-10.6/src/bin/sage-python -m sage_docbuild --no-pdf-links 
> reference/asymptotic inventory
> myuserid  245187  0.0  1.4 5897396 482376 ?      S    Apr12   0:02 python3 
> -m sage_docbuild --no-pdf-links reference/asymptotic inventory
> myuserid  247309  0.0  0.0   2584   956 ?        S    Apr12   0:00 /bin/sh 
> /opt/Sage/sage-10.6/src/bin/sage-python -m sage_docbuild --no-pdf-links 
> reference/calculus inventory
> myuserid  247421  0.0  1.4 5897300 482752 ?      S    Apr12   0:02 python3 
> -m sage_docbuild --no-pdf-links reference/calculus inventory
> myuserid  247894  0.0  0.0      0     0 ?        Z    Apr12   0:00 
> [sage-python] <defunct>
> myuserid  252785  0.0  0.0      0     0 ?        Z    Apr12   0:00 
> [sage-python] <defunct>
> myuserid  253518  0.0  0.0      0     0 ?        Z    Apr12   0:00 
> [sage-python] <defunct>
> myuserid  265977  0.0  0.0   2584   956 ?        S    Apr12   0:00 /bin/sh 
> /opt/Sage/sage-10.6/src/bin/sage-python -m sage_docbuild --no-pdf-links 
> reference/cryptography inventory
> myuserid  266008  0.0  1.4 5898164 483948 ?      S    Apr12   0:02 python3 
> -m sage_docbuild --no-pdf-links reference/cryptography inventory
> myuserid  268893  0.0  0.0      0     0 ?        Z    Apr12   0:00 
> [sage-python] <defunct>
> myuserid  269896  0.0  0.0   2584   912 ?        S    Apr12   0:00 /bin/sh 
> /opt/Sage/sage-10.6/src/bin/sage-python -m sage_docbuild --no-pdf-links 
> reference/databases inventory
> myuserid  269942  0.0  1.5 5902180 487812 ?      S    Apr12   0:02 python3 
> -m sage_docbuild --no-pdf-links reference/databases inventory
> myuserid  276088  0.0  0.0      0     0 ?        Z    Apr12   0:00 
> [sage-python] <defunct>
> myuserid  287956  0.0  0.0   2584   884 ?        S    Apr12   0:00 /bin/sh 
> /opt/Sage/sage-10.6/src/bin/sage-python -m sage_docbuild --no-pdf-links 
> reference/euclidean_spaces inventory
> myuserid  287987  0.0  1.5 5934592 518824 ?      S    Apr12   0:02 python3 
> -m sage_docbuild --no-pdf-links reference/euclidean_spaces inventory
> myuserid  292050  0.0  0.0      0     0 ?        Z    Apr12   0:00 
> [sage-python] <defunct>
> myuserid  294517  0.0  0.0   2584   928 ?        S    Apr12   0:00 /bin/sh 
> /opt/Sage/sage-10.6/src/bin/sage-python -m sage_docbuild --no-pdf-links 
> reference/game_theory inventory
> myuserid  294558  0.0  1.4 5897080 481316 ?      S    Apr12   0:01 python3 
> -m sage_docbuild --no-pdf-links reference/game_theory inventory
> myuserid  301601  0.0  0.0      0     0 ?        Z    Apr12   0:00 
> [sage-python] <defunct>
> myuserid  311825  0.0  0.0   2584   912 ?        S    Apr12   0:00 /bin/sh 
> /opt/Sage/sage-10.6/src/bin/sage-python -m sage_docbuild --no-pdf-links 
> reference/homology inventory
> myuserid  311856  0.0  1.4 5896912 481720 ?      S    Apr12   0:01 python3 
> -m sage_docbuild --no-pdf-links reference/homology inventory
> myuserid  314197  0.0  0.0      0     0 ?        Z    Apr12   0:00 
> [sage-python] <defunct>
> myuserid  318834  0.0  0.0   2584   912 ?        S    Apr12   0:00 /bin/sh 
> /opt/Sage/sage-10.6/src/bin/sage-python -m sage_docbuild --no-pdf-links 
> reference/knots inventory
> myuserid  318865  0.0  1.4 5896756 482660 ?      S    Apr12   0:01 python3 
> -m sage_docbuild --no-pdf-links reference/knots inventory
> myuserid  321105  0.0  0.0      0     0 ?        Z    Apr12   0:00 
> [sage-python] <defunct>
> myuserid  325926  0.0  0.0   2584   908 ?        S    Apr12   0:00 /bin/sh 
> /opt/Sage/sage-10.6/src/bin/sage-python -m sage_docbuild --no-pdf-links 
> reference/logic inventory
> myuserid  325957  0.0  1.4 5895320 480732 ?      S    Apr12   0:01 python3 
> -m sage_docbuild --no-pdf-links reference/logic inventory
> myuserid  328112  0.0  0.0      0     0 ?        Z    Apr12   0:00 
> [sage-python] <defunct>
> myuserid  347301  0.0  0.0   2584   904 ?        S    Apr12   0:00 /bin/sh 
> /opt/Sage/sage-10.6/src/bin/sage-python -m sage_docbuild --no-pdf-links 
> reference/number_fields inventory
> myuserid  347332  0.0  1.4 5897268 482656 ?      S    Apr12   0:01 python3 
> -m sage_docbuild --no-pdf-links reference/number_fields inventory
> myuserid  349380  0.0  0.0      0     0 ?        Z    Apr12   0:00 
> [sage-python] <defunct>
> myuserid  356077  0.0  0.0   9212  2280 pts/2    S+   10:17   0:00 grep 
> python
>
> ======================================================================
> output of tail install.log, showing build stopped in mid-air
> ======================================================================
> [sagemath_doc_html-none] [spkg-install] [modules  ] The inventory file is 
> in ../../local/share/doc/sage/inventory/en/reference/modules.
> [sagemath_doc_html-none] [spkg-install] sage --docbuild --no-pdf-links 
> reference/monoids inventory 
> [sagemath_doc_html-none] [spkg-install] [monoids  ] building [inventory]: 
> targets for 13 source files that are out of date
> [sagemath_doc_html-none] [spkg-install] [monoids  ] updating environment: 
> [new config] 13 added, 0 changed, 0 removed
> [sagemath_doc_html-none] [spkg-install] [monoids  ] The inventory file is 
> in ../../local/share/doc/sage/inventory/en/reference/monoids.
> [sagemath_doc_html-none] [spkg-install] sage --docbuild --no-pdf-links 
> reference/noncommutative_polynomial_rings inventory 
> [sagemath_doc_html-none] [spkg-install] [noncommut] building [inventory]: 
> targets for 10 source files that are out of date
> [sagemath_doc_html-none] [spkg-install] [noncommut] updating environment: 
> [new config] 10 added, 0 changed, 0 removed
> [sagemath_doc_html-none] [spkg-install] [noncommut] The inventory file is 
> in 
> ../../local/share/doc/sage/inventory/en/reference/noncommutative_polynomial_rings.
> [sagemath_doc_html-none] [spkg-install] sage --docbuild --no-pdf-links 
> reference/number_fields inventory 
>
>

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