a normal Sage way would be
make fpylll
(unless you are doing something non-standard)
On Fri, Dec 23, 2022 at 12:12 AM Josef Svoboda <josefsvo...@gmail.com>
wrote:
> This looks similar so I will ask here:
> I am trying to build sage 9.8.beta6 (which I cloned from github) and I
> have an issue that fpylll is not installed and sagemath-standard requires
> it. If I try to install it I get an error:
> How do I fix it?
>
>
> $ sage -pip install fpylll
> Collecting fpylll
> Using cached fpylll-0.5.8.tar.gz (1.1 MB)
> Preparing metadata (setup.py) ... done
> Building wheels for collected packages: fpylll
> Building wheel for fpylll (setup.py) ... error
> error: subprocess-exited-with-error
>
> × python setup.py bdist_wheel did not run successfully.
> │ exit code: 1
> ╰─> [132 lines of output]
> running bdist_wheel
> running build
> running build_py
> creating build
> creating build/lib.linux-x86_64-cpython-310
> creating build/lib.linux-x86_64-cpython-310/fpylll
> copying src/fpylll/__init__.py ->
> build/lib.linux-x86_64-cpython-310/fpylll
> creating build/lib.linux-x86_64-cpython-310/fpylll/gmp
> copying src/fpylll/gmp/__init__.py ->
> build/lib.linux-x86_64-cpython-310/fpylll/gmp
> creating build/lib.linux-x86_64-cpython-310/fpylll/fplll
> copying src/fpylll/fplll/__init__.py ->
> build/lib.linux-x86_64-cpython-310/fpylll/fplll
> creating build/lib.linux-x86_64-cpython-310/fpylll/algorithms
> copying src/fpylll/algorithms/babai.py ->
> build/lib.linux-x86_64-cpython-310/fpylll/algorithms
> copying src/fpylll/algorithms/bkz2.py ->
> build/lib.linux-x86_64-cpython-310/fpylll/algorithms
> copying src/fpylll/algorithms/__init__.py ->
> build/lib.linux-x86_64-cpython-310/fpylll/algorithms
> copying src/fpylll/algorithms/simple_bkz.py ->
> build/lib.linux-x86_64-cpython-310/fpylll/algorithms
> copying src/fpylll/algorithms/bkz.py ->
> build/lib.linux-x86_64-cpython-310/fpylll/algorithms
> copying src/fpylll/algorithms/simple_dbkz.py ->
> build/lib.linux-x86_64-cpython-310/fpylll/algorithms
> creating build/lib.linux-x86_64-cpython-310/fpylll/tools
> copying src/fpylll/tools/bkz_plot.py ->
> build/lib.linux-x86_64-cpython-310/fpylll/tools
> copying src/fpylll/tools/benchmark.py ->
> build/lib.linux-x86_64-cpython-310/fpylll/tools
> copying src/fpylll/tools/compare.py ->
> build/lib.linux-x86_64-cpython-310/fpylll/tools
> copying src/fpylll/tools/quality.py ->
> build/lib.linux-x86_64-cpython-310/fpylll/tools
> copying src/fpylll/tools/__init__.py ->
> build/lib.linux-x86_64-cpython-310/fpylll/tools
> copying src/fpylll/tools/bkz_simulator.py ->
> build/lib.linux-x86_64-cpython-310/fpylll/tools
> copying src/fpylll/tools/bkz_stats.py ->
> build/lib.linux-x86_64-cpython-310/fpylll/tools
> running build_ext
> Compiling src/fpylll/gmp/pylong.pyx because it changed.
> Compiling src/fpylll/fplll/integer_matrix.pyx because it changed.
> Compiling src/fpylll/fplll/gso.pyx because it changed.
> Compiling src/fpylll/fplll/lll.pyx because it changed.
> Compiling src/fpylll/fplll/wrapper.pyx because it changed.
> Compiling src/fpylll/fplll/bkz_param.pyx because it changed.
> Compiling src/fpylll/fplll/bkz.pyx because it changed.
> Compiling src/fpylll/fplll/enumeration.pyx because it changed.
> Compiling src/fpylll/fplll/svpcvp.pyx because it changed.
> Compiling src/fpylll/fplll/pruner.pyx because it changed.
> Compiling src/fpylll/util.pyx because it changed.
> Compiling src/fpylll/io.pyx because it changed.
> Compiling src/fpylll/config.pyx because it changed.
> Compiling src/fpylll/numpy.pyx because it changed.
> [ 1/14] Cythonizing src/fpylll/config.pyx
> [ 2/14] Cythonizing src/fpylll/fplll/bkz.pyx
> [ 3/14] Cythonizing src/fpylll/fplll/bkz_param.pyx
> [ 4/14] Cythonizing src/fpylll/fplll/enumeration.pyx
> [ 5/14] Cythonizing src/fpylll/fplll/gso.pyx
> [ 6/14] Cythonizing src/fpylll/fplll/integer_matrix.pyx
> [ 7/14] Cythonizing src/fpylll/fplll/lll.pyx
> [ 8/14] Cythonizing src/fpylll/fplll/pruner.pyx
> [ 9/14] Cythonizing src/fpylll/fplll/svpcvp.pyx
> [10/14] Cythonizing src/fpylll/fplll/wrapper.pyx
> [11/14] Cythonizing src/fpylll/gmp/pylong.pyx
> [12/14] Cythonizing src/fpylll/io.pyx
> [13/14] Cythonizing src/fpylll/numpy.pyx
> [14/14] Cythonizing src/fpylll/util.pyx
> build/src/fpylll/gmp/pylong.c: In function
> ‘__pyx_f_6fpylll_3gmp_6pylong_mpz_get_pylong_large’:
> build/src/fpylll/gmp/pylong.c:1275:13: warning: assignment to
> ‘PyObject *’ {aka ‘struct _object *’} from incompatible pointer type
> ‘PyLongObject *’ {aka ‘struct _longobject *’} [-Wincompatible-pointer-types]
> 1275 | __pyx_t_2 = _PyLong_New(__pyx_v_pylong_size); if
> (unlikely(!__pyx_t_2)) __PYX_ERR(0, 43, __pyx_L1_error)
> | ^
> build/src/fpylll/fplll/gso.cpp: In function ‘PyObject*
> __pyx_pf_6fpylll_5fplll_3gso_6MatGSO_50from_canonical(__pyx_obj_6fpylll_5fplll_3gso_MatGSO*,
> PyObject*, int, int)’:
> build/src/fpylll/fplll/gso.cpp:18675:121: error: ‘class
> fplll::MatGSO<fplll::Z_NR<__mpz_struct [1]>, fplll::FP_NR<double> >’ has no
> member named ‘from_canonical’
> 18675 | ((fplll::MatGSO<fplll::Z_NR<mpz_t>
> ,fplll::FP_NR<__pyx_t_6fpylll_5fplll_4decl_d_t> >
> *)__pyx_v_self->_core.mpz_d)->from_canonical(__pyx_v_cv.d, __pyx_v_cw.d,
> __pyx_v_start, __pyx_v_dimension);
> |
> ^~~~~~~~~~~~~~
> build/src/fpylll/fplll/gso.cpp:18735:123: error: ‘class
> fplll::MatGSO<fplll::Z_NR<__mpz_struct [1]>, fplll::FP_NR<long double> >’
> has no member named ‘from_canonical’
> 18735 | ((fplll::MatGSO<fplll::Z_NR<mpz_t>
> ,fplll::FP_NR<__pyx_t_6fpylll_5fplll_4decl_ld_t> >
> *)__pyx_v_self->_core.mpz_ld)->from_canonical(__pyx_v_cv.ld,
> __pyx_v_cw.ld, __pyx_v_start, __pyx_v_dimension);
> |
> ^~~~~~~~~~~~~~
> build/src/fpylll/fplll/gso.cpp:18795:98: error: ‘class
> fplll::MatGSO<fplll::Z_NR<__mpz_struct [1]>, fplll::FP_NR<__mpfr_struct
> [1]> >’ has no member named ‘from_canonical’
> 18795 | ((fplll::MatGSO<fplll::Z_NR<mpz_t> ,fplll::FP_NR<mpfr_t>
> > *)__pyx_v_self->_core.mpz_mpfr)->from_canonical(__pyx_v_cv.mpfr,
> __pyx_v_cw.mpfr, __pyx_v_start, __pyx_v_dimension);
> |
> ^~~~~~~~~~~~~~
> build/src/fpylll/fplll/gso.cpp:18855:121: error: ‘class
> fplll::MatGSO<fplll::Z_NR<long int>, fplll::FP_NR<double> >’ has no member
> named ‘from_canonical’
> 18855 | ((fplll::MatGSO<fplll::Z_NR<long>
> ,fplll::FP_NR<__pyx_t_6fpylll_5fplll_4decl_d_t> >
> *)__pyx_v_self->_core.long_d)->from_canonical(__pyx_v_cv.d, __pyx_v_cw.d,
> __pyx_v_start, __pyx_v_dimension);
> |
> ^~~~~~~~~~~~~~
> build/src/fpylll/fplll/gso.cpp:18915:123: error: ‘class
> fplll::MatGSO<fplll::Z_NR<long int>, fplll::FP_NR<long double> >’ has no
> member named ‘from_canonical’
> 18915 | ((fplll::MatGSO<fplll::Z_NR<long>
> ,fplll::FP_NR<__pyx_t_6fpylll_5fplll_4decl_ld_t> >
> *)__pyx_v_self->_core.long_ld)->from_canonical(__pyx_v_cv.ld,
> __pyx_v_cw.ld, __pyx_v_start, __pyx_v_dimension);
> |
> ^~~~~~~~~~~~~~
> build/src/fpylll/fplll/gso.cpp: In function ‘PyObject*
> __pyx_pf_6fpylll_5fplll_3gso_6MatGSO_52to_canonical(__pyx_obj_6fpylll_5fplll_3gso_MatGSO*,
> PyObject*, int)’:
> build/src/fpylll/fplll/gso.cpp:19141:121: error: ‘class
> fplll::MatGSO<fplll::Z_NR<__mpz_struct [1]>, fplll::FP_NR<double> >’ has no
> member named ‘to_canonical’
> 19141 | ((fplll::MatGSO<fplll::Z_NR<mpz_t>
> ,fplll::FP_NR<__pyx_t_6fpylll_5fplll_4decl_d_t> >
> *)__pyx_v_self->_core.mpz_d)->to_canonical(__pyx_v_cw.d, __pyx_v_cv.d,
> __pyx_v_start);
> |
> ^~~~~~~~~~~~
> build/src/fpylll/fplll/gso.cpp:19201:123: error: ‘class
> fplll::MatGSO<fplll::Z_NR<__mpz_struct [1]>, fplll::FP_NR<long double> >’
> has no member named ‘to_canonical’
> 19201 | ((fplll::MatGSO<fplll::Z_NR<mpz_t>
> ,fplll::FP_NR<__pyx_t_6fpylll_5fplll_4decl_ld_t> >
> *)__pyx_v_self->_core.mpz_ld)->to_canonical(__pyx_v_cw.ld, __pyx_v_cv.ld,
> __pyx_v_start);
> |
> ^~~~~~~~~~~~
> build/src/fpylll/fplll/gso.cpp:19261:98: error: ‘class
> fplll::MatGSO<fplll::Z_NR<__mpz_struct [1]>, fplll::FP_NR<__mpfr_struct
> [1]> >’ has no member named ‘to_canonical’
> 19261 | ((fplll::MatGSO<fplll::Z_NR<mpz_t> ,fplll::FP_NR<mpfr_t>
> > *)__pyx_v_self->_core.mpz_mpfr)->to_canonical(__pyx_v_cw.mpfr,
> __pyx_v_cv.mpfr, __pyx_v_start);
> |
> ^~~~~~~~~~~~
> build/src/fpylll/fplll/gso.cpp:19321:121: error: ‘class
> fplll::MatGSO<fplll::Z_NR<long int>, fplll::FP_NR<double> >’ has no member
> named ‘to_canonical’
> 19321 | ((fplll::MatGSO<fplll::Z_NR<long>
> ,fplll::FP_NR<__pyx_t_6fpylll_5fplll_4decl_d_t> >
> *)__pyx_v_self->_core.long_d)->to_canonical(__pyx_v_cw.d, __pyx_v_cv.d,
> __pyx_v_start);
> |
> ^~~~~~~~~~~~
> build/src/fpylll/fplll/gso.cpp:19381:123: error: ‘class
> fplll::MatGSO<fplll::Z_NR<long int>, fplll::FP_NR<long double> >’ has no
> member named ‘to_canonical’
> 19381 | ((fplll::MatGSO<fplll::Z_NR<long>
> ,fplll::FP_NR<__pyx_t_6fpylll_5fplll_4decl_ld_t> >
> *)__pyx_v_self->_core.long_ld)->to_canonical(__pyx_v_cw.ld, __pyx_v_cv.ld,
> __pyx_v_start);
> |
> ^~~~~~~~~~~~
> build/src/fpylll/fplll/gso.cpp: In function ‘PyObject*
> __pyx_pf_6fpylll_5fplll_3gso_6MatGSO_54babai(__pyx_obj_6fpylll_5fplll_3gso_MatGSO*,
> PyObject*, int, int, PyObject*)’:
> build/src/fpylll/fplll/gso.cpp:19700:130: error: ‘class
> fplll::MatGSO<fplll::Z_NR<__mpz_struct [1]>, fplll::FP_NR<double> >’ has no
> member named ‘babai’
> 19700 | (void)(((fplll::MatGSO<fplll::Z_NR<mpz_t>
> ,fplll::FP_NR<__pyx_t_6fpylll_5fplll_4decl_d_t> >
> *)__pyx_v_self->_core.mpz_d)->babai(__pyx_v_cw.mpz, __pyx_v_cv.d,
> __pyx_v_start, __pyx_v_dimension, __pyx_t_8));
> |
> ^~~~~
> build/src/fpylll/fplll/gso.cpp:19761:132: error: ‘class
> fplll::MatGSO<fplll::Z_NR<__mpz_struct [1]>, fplll::FP_NR<long double> >’
> has no member named ‘babai’
> 19761 | (void)(((fplll::MatGSO<fplll::Z_NR<mpz_t>
> ,fplll::FP_NR<__pyx_t_6fpylll_5fplll_4decl_ld_t> >
> *)__pyx_v_self->_core.mpz_ld)->babai(__pyx_v_cw.mpz, __pyx_v_cv.ld,
> __pyx_v_start, __pyx_v_dimension, __pyx_t_8));
> |
> ^~~~~
> build/src/fpylll/fplll/gso.cpp:19822:107: error: ‘class
> fplll::MatGSO<fplll::Z_NR<__mpz_struct [1]>, fplll::FP_NR<__mpfr_struct
> [1]> >’ has no member named ‘babai’
> 19822 | (void)(((fplll::MatGSO<fplll::Z_NR<mpz_t>
> ,fplll::FP_NR<mpfr_t> >
> *)__pyx_v_self->_core.mpz_mpfr)->babai(__pyx_v_cw.mpz, __pyx_v_cv.mpfr,
> __pyx_v_start, __pyx_v_dimension, __pyx_t_8));
> |
> ^~~~~
> build/src/fpylll/fplll/gso.cpp:19883:130: error: ‘class
> fplll::MatGSO<fplll::Z_NR<long int>, fplll::FP_NR<double> >’ has no member
> named ‘babai’
> 19883 | (void)(((fplll::MatGSO<fplll::Z_NR<long>
> ,fplll::FP_NR<__pyx_t_6fpylll_5fplll_4decl_d_t> >
> *)__pyx_v_self->_core.long_d)->babai(__pyx_v_cw.__pyx_long, __pyx_v_cv.d,
> __pyx_v_start, __pyx_v_dimension, __pyx_t_8));
> |
> ^~~~~
> build/src/fpylll/fplll/gso.cpp:19944:132: error: ‘class
> fplll::MatGSO<fplll::Z_NR<long int>, fplll::FP_NR<long double> >’ has no
> member named ‘babai’
> 19944 | (void)(((fplll::MatGSO<fplll::Z_NR<long>
> ,fplll::FP_NR<__pyx_t_6fpylll_5fplll_4decl_ld_t> >
> *)__pyx_v_self->_core.long_ld)->babai(__pyx_v_cw.__pyx_long,
> __pyx_v_cv.ld, __pyx_v_start, __pyx_v_dimension, __pyx_t_8));
> |
> ^~~~~
> build/src/fpylll/fplll/gso.cpp:20043:41: error: ‘class
> fplll::MatGSOInterface<fplll::Z_NR<__mpz_struct [1]>, fplll::FP_NR<double>
> >’ has no member named ‘babai’
> 20043 |
> (void)(__pyx_v_self->_core.mpz_d->babai(__pyx_v_cw.mpz, __pyx_v_cv.d,
> __pyx_v_start, __pyx_v_dimension));
> | ^~~~~
> build/src/fpylll/fplll/gso.cpp:20103:42: error: ‘class
> fplll::MatGSOInterface<fplll::Z_NR<__mpz_struct [1]>, fplll::FP_NR<long
> double> >’ has no member named ‘babai’
> 20103 |
> (void)(__pyx_v_self->_core.mpz_ld->babai(__pyx_v_cw.mpz, __pyx_v_cv.ld,
> __pyx_v_start, __pyx_v_dimension));
> | ^~~~~
> build/src/fpylll/fplll/gso.cpp:20163:43: error: ‘class
> fplll::MatGSOInterface<fplll::Z_NR<__mpz_struct [1]>,
> fplll::FP_NR<dpe_struct [1]> >’ has no member named ‘babai’
> 20163 |
> (void)(__pyx_v_self->_core.mpz_dpe->babai(__pyx_v_cw.mpz, __pyx_v_cv.dpe,
> __pyx_v_start, __pyx_v_dimension));
> | ^~~~~
> build/src/fpylll/fplll/gso.cpp:20223:44: error: ‘class
> fplll::MatGSOInterface<fplll::Z_NR<__mpz_struct [1]>,
> fplll::FP_NR<__mpfr_struct [1]> >’ has no member named ‘babai’
> 20223 |
> (void)(__pyx_v_self->_core.mpz_mpfr->babai(__pyx_v_cw.mpz, __pyx_v_cv.mpfr,
> __pyx_v_start, __pyx_v_dimension));
> | ^~~~~
> build/src/fpylll/fplll/gso.cpp:20283:42: error: ‘class
> fplll::MatGSOInterface<fplll::Z_NR<long int>, fplll::FP_NR<double> >’ has
> no member named ‘babai’
> 20283 |
> (void)(__pyx_v_self->_core.long_d->babai(__pyx_v_cw.__pyx_long,
> __pyx_v_cv.d, __pyx_v_start, __pyx_v_dimension));
> | ^~~~~
> build/src/fpylll/fplll/gso.cpp:20343:43: error: ‘class
> fplll::MatGSOInterface<fplll::Z_NR<long int>, fplll::FP_NR<long double> >’
> has no member named ‘babai’
> 20343 |
> (void)(__pyx_v_self->_core.long_ld->babai(__pyx_v_cw.__pyx_long,
> __pyx_v_cv.ld, __pyx_v_start, __pyx_v_dimension));
> | ^~~~~
> build/src/fpylll/fplll/gso.cpp:20403:44: error: ‘class
> fplll::MatGSOInterface<fplll::Z_NR<long int>, fplll::FP_NR<dpe_struct [1]>
> >’ has no member named ‘babai’
> 20403 |
> (void)(__pyx_v_self->_core.long_dpe->babai(__pyx_v_cw.__pyx_long,
> __pyx_v_cv.dpe, __pyx_v_start, __pyx_v_dimension));
> | ^~~~~
> build/src/fpylll/fplll/gso.cpp:20463:45: error: ‘class
> fplll::MatGSOInterface<fplll::Z_NR<long int>, fplll::FP_NR<__mpfr_struct
> [1]> >’ has no member named ‘babai’
> 20463 |
> (void)(__pyx_v_self->_core.long_mpfr->babai(__pyx_v_cw.__pyx_long,
> __pyx_v_cv.mpfr, __pyx_v_start, __pyx_v_dimension));
> | ^~~~~
> error: Command "gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g
> -fwrapv -O3 -Wall -Wno-unused -g -O2 -fPIC -Isrc/fpylll/fplll
> -I/home/josef/programs/sage/local/var/lib/sage/venv-python3.10.8/lib/python3.10/site-packages/cysignals
> -I/home/josef/programs/sage/local/var/lib/sage/venv-python3.10.8/include
> -I/home/josef/programs/sage/local/var/lib/sage/venv-python3.10.8/lib/python3.10/site-packages/numpy/core/include
> -I/home/josef/programs/sage/local/var/lib/sage/venv-python3.10.8/include/python3.10
> -c build/src/fpylll/fplll/gso.cpp -o
> build/temp.linux-x86_64-cpython-310/build/src/fpylll/fplll/gso.o
> -std=c++11" failed with exit status 1
> [end of output]
>
> note: This error originates from a subprocess, and is likely not a
> problem with pip.
> ERROR: Failed building wheel for fpylll
> Running setup.py clean for fpylll
> Failed to build fpylll
>
>
> Best,
> Josef
>
> On Saturday, 23 January 2021 at 04:12:42 UTC+1 Matthias Koeppe wrote:
>
>> This failure on Cygwin has been fixed in
>> https://trac.sagemath.org/ticket/31146
>>
>> On Thursday, January 21, 2021 at 10:29:41 AM UTC-8 user...@gmail.com
>> wrote:
>>
>>> While building Sage 9.2 from source, the `make` process throws an error
>>> while building the "fpylll.config" extension. I believe the most relevant
>>> log information is:
>>> build/src/fpylll/config.cpp:1807:37: error:
>>> 'FPLLL_WITH_RECURSIVE_ENUM' was not declared in this scope
>>> 1807 | __pyx_t_4 =
>>> __Pyx_PyBool_FromLong(FPLLL_WITH_RECURSIVE_ENUM); if (unlikely(!__pyx_t_4))
>>> __PYX_ERR(0, 40, __pyx_L1_error)
>>> | ^~~~~~~~~~~~~~~~~~~~~~~~~
>>> error: command 'gcc' failed with exit status 1
>>>
>>> What might cause this, and how would I fix it?
>>>
>>> (~/sage/config.log is not attached because it was a 0 byte file that
>>> can't be opened, and thus couldn't be attached)
>>>
>>> If you have any questions or suggestions, please let me know.
>>>
>>>
>>>
>>> <https://www.avast.com/sig-email?utm_medium=email&utm_source=link&utm_campaign=sig-email&utm_content=webmail&utm_term=icon>
>>> Virus-free.
>>> www.avast.com
>>> <https://www.avast.com/sig-email?utm_medium=email&utm_source=link&utm_campaign=sig-email&utm_content=webmail&utm_term=link>
>>> <#m_-7456261359131131524_m_4369287594810103409_m_5648881936583264655_DAB4FAD8-2DD7-40BB-A1B8-4E2AA1F9FDF2>
>>>
>> --
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