OK, now taking system packages again, the compilation stopped with sagelib
again. I'll make a new thread, because its another problem, I think ...
Tobias
Tobias Weiss schrieb am Samstag, 28. November 2020 um 13:16:22 UTC+1:
> Is it possible to create a rpm file after build? If I install sage with
> rpm, the system knows about all dependencies and warns me if I'm going to
> hurt them.
>
> Tobias
>
> dim...@gmail.com schrieb am Freitag, 27. November 2020 um 22:53:06 UTC+1:
>
>> On Fri, Nov 27, 2020 at 9:36 PM Tobias Weiss <tobwe...@web.de> wrote:
>> >
>> > I still have a question: Keeping in mind Tumbleweed is a rolling
>> release of Opensuse - is it clever to build a fixed binary? Will this
>> binary persist with the rolling software updates?
>>
>> we regularly test SageMath on Gentoo, which is a rolling release system,
>> too.
>> Needless to say, once in a while one might need to rebuild something,
>> if a library SageMath depends on was updated
>> in an incompatible way.
>>
>> >
>> > Maybe that's why the dependencies of source and binary package don't
>> work?
>>
>> no, it's not they don't work, it's a design choice, leading to fewer
>> updates;
>> often only a binary package changes, then if it is a dynamic library
>> then nothing needs to be rebuilt.
>> (perhaps - I am not sure here; perhaps it's just a historical choice
>> that stayed)
>>
>>
>> > I will test these dependencies tomorrow at all, so that I don't tell
>> you wrong things and the dependencies work at all ...
>> >
>> >
>> > Tobias
>> >
>> > Tobias Weiss schrieb am Freitag, 27. November 2020 um 21:32:15 UTC+1:
>> >>
>> >> OK, so I stop the current build. Then I install for every dependency
>> both - devel and binary package - and retry the build tomorrow.
>> >>
>> >> Then it don't makes sence, that the binary is not installed
>> automatically when I install the source package - but this is an Opensuse
>> problem. Once, it was like this ...
>> >>
>> >>
>> >> Thank you!
>> >>
>> >> Tobias
>> >>
>> >> dim...@gmail.com schrieb am Freitag, 27. November 2020 um 21:05:45
>> UTC+1:
>> >>>
>> >>> On Fri, Nov 27, 2020 at 7:21 PM Tobias Weiss <tobwe...@web.de>
>> wrote:
>> >>> >
>> >>> > ... I thought there must be a reason I can install the development
>> package without binary package. But no it makes no sense to me. Can this be
>> the reason of both complile errors?
>> >>> >
>> >>> > Tobias
>> >>> >
>> >>> > Tobias Weiss schrieb am Freitag, 27. November 2020 um 20:15:24
>> UTC+1:
>> >>> >>
>> >>> >> ... how does compiling work? Needs the compiler also the binary of
>> some library or only the library-devel package with the code? For most
>> packages I only installed the devel package ...
>> >>> I don't know much about OpenSUSE, but some distributions typically
>> >>> have <library>-dev packages dependent on <library> packages, and
>> >>> some (e.g. Fedora) do not, i.e. you always need to install both
>> >>> <library>-dev (or <library>-devel) and <library>.
>> >>> It seems to me that OpenSUSE is an rpm-based distro, thus it would be
>> >>> like Fedora, and require <library>-devel and <library> in some cases.
>> >>>
>> >>>
>> >>> If you just run ./configure
>> >>> it will print at the end some messages about packages that are
>> >>> recommended to be installed (after guessing, hopefully correctly
>> >>> the kind of Linux system it is on)
>> >>>
>> >>>
>> >>> >>
>> >>> >> Tobias
>> >>> >>
>> >>> >> Tobias Weiss schrieb am Freitag, 27. November 2020 um 19:30:49
>> UTC+1:
>> >>> >>>
>> >>> >>> I didn't want to find out, what is the problem with sagelib. The
>> error was from the system packages. So I wanted no conflicts between system
>> wide packages and the packages from the tarball. So I configured like this:
>> >>> >>>
>> >>> >>> ./configure --with-system-arb=no --with-system-boost=no
>> --with-system-brial=no --with-system-cddlib=no --with-system-cliquer=no
>> --with-system-ecm=no --with-system-eclib=no --with-system-fflas_ffpack=no
>> --
>> >>> >>> with-system-flint=no --with-system-flintqs=no
>> --with-system-fplll=no --with-system-freetype=no --with-system-gc=no
>> --with-system-giac=no --with-system-givaro=no --with-system-glpk=no
>> --with-system-gmp=no --with-system-gsl=no
>> >>> >>> --with-system-iconv=no --with-system-iml=no --with-system-isl=no
>> --with-system-lcalc=no --with-system-libbraiding=no
>> --with-system-libatomic_ops=no --with-system-libffi=no
>> --with-system-libgd=no --with-system-libsemigroups=
>> >>> >>> no --with-system-lrcalc=no --with-system-m4rie=no
>> --with-system-m4ri=no --with-system-mpc=no --with-system-mpfi=no
>> --with-system-mpfr=no --with-system-mpir=no --with-system-ninja_build=no
>> --with-system-ntl=no --with-system-o
>> >>> >>> penblas=no --with-system-pandoc=no --with-system-pari=no
>> --with-system-pari_galdata=no --with-system-pari_seadata_small=no
>> --with-system-pcre=no --with-system-perl_term_readline_gnu=no
>> --with-system-planarity=no --with-syste
>> >>> >>> m-ppl=no --with-system-rw=no --with-system-readline=no
>> --with-system-suitesparse=no --with-system-symmetrica=no
>> --with-system-yasm=no --with-system-zeromq=no --with-system-zn_poly=no
>> --with-system-pynac=no
>> >>> >>>
>> >>> >>> Sure, I wanted to use gcc from system. But it was also compiled
>> newly.
>> >>> >>>
>> >>> >>> Shall I reproduce the error with sagelib, when I have time?
>> >>> >>>
>> >>> >>>
>> >>> >>> Tobias
>> >>> >>>
>> >>> >>> dim...@gmail.com schrieb am Freitag, 27. November 2020 um
>> 18:49:10 UTC+1:
>> >>> >>>>
>> >>> >>>> On Fri, Nov 27, 2020 at 5:44 PM Tobias Weiss <tobwe...@web.de>
>> wrote:
>> >>> >>>> >
>> >>> >>>> > OK! I just uninstalled flint and did configure without system
>> packages again (after make clean). I can tell you if it works tomorrow or
>> later, because of compile time ...
>> >>> >>>> >
>> >>> >>>> > Well, I first tried to compile with system packages, but this
>> made an error, when making sagelib - beacause of pari, I think.
>> >>> >>>>
>> >>> >>>> We very much welcome reports of failures like this, as we strive
>> to
>> >>> >>>> unvendor as much as possible.
>> >>> >>>> Skipping all the system packages is surely a huge overkill -
>> e.g. why
>> >>> >>>> on Earth would you need to build gcc
>> >>> >>>> on a regular Linux system?
>> >>> >>>>
>> >>> >>>>
>> >>> >>>> >
>> >>> >>>> >
>> >>> >>>> > Thank you! I hope this works,
>> >>> >>>> > Tobias
>> >>> >>>> >
>> >>> >>>> > dim...@gmail.com schrieb am Freitag, 27. November 2020 um
>> 16:09:05 UTC+1:
>> >>> >>>> >>
>> >>> >>>> >>
>> >>> >>>> >>
>> >>> >>>> >> On Fri, 27 Nov 2020, 14:21 Tobias, <tobwe...@web.de> wrote:
>> >>> >>>> >>>
>> >>> >>>> >>> Hallo Everybody,
>> >>> >>>> >>>
>> >>> >>>> >>> on OpenSuse Tumbleweed I try building sage 9.2 without most
>> of packages from
>> >>> >>>> >>> system. The make command stopped compiling pynac because
>> "the programm needs
>> >>> >>>> >>> libflint", but flint was already compiled by make command.
>> >>> >>>> >>>
>> >>> >>>> >>>
>> >>> >>>> >>>
>> >>> >>>> >>> Then I wanted to start make command again with pynac, but
>> make skipped pynac
>> >>> >>>> >>> and started with the next package.
>> >>> >>>> >>>
>> >>> >>>> >>>
>> >>> >>>> >>> What should I do? I would probably restart building and
>> configure with --with-
>> >>> >>>> >>> system-flint=yes and --with-system-flintqs=yes
>> >>> >>>> >>> But it took so long to come here ...
>> >>> >>>> >>>
>> >>> >>>> >>>
>> >>> >>>> >>> What would you say?
>> >>> >>>> >>
>> >>> >>>> >>
>> >>> >>>> >> I guess you have flint installed systemwide, as well, and
>> pynac gets confused as to which flint to use.
>> >>> >>>> >>
>> >>> >>>> >>>
>> >>> >>>> >>>
>> >>> >>>> >>> Kind regards,
>> >>> >>>> >>> Tobias
>> >>> >>>> >>>
>> >>> >>>> >>> from log file
>> >>> >>>> >>> >
>> sage-9.2/local/var/tmp/sage/build/pynac-0.7.26.sage-2020-04-03.p0/src/config
>>
>> >>> >>>> >>> >.log
>> >>> >>>> >>>
>> >>> >>>> >>> > configure:17041: gcc -o conftest -g -O2
>> >>> >>>> >>> > -Wl,-rpath-link,/home/tobias/bin/sage-9.2/local/lib
>> >>> >>>> >>> > -L/home/tobias/bin/sage-9.2/local/lib
>> >>> >>>> >>> > -Wl,-rpath,/home/tobias/bin/sage-9.2/local/lib conftest.c
>> -lflint -lgmp
>> >>> >>>> >>> > >&5
>> >>> >>>> >>> >
>> /usr/lib64/gcc/x86_64-suse-linux/10/../../../../x86_64-suse-linux/bin/ld:
>> >>> >>>> >>> > warning: libgmp.so.23, needed by
>> >>> >>>> >>> > /home/tobias/bin/sage-9.2/local/lib/libflint.so, may
>> conflict with
>> >>> >>>> >>> > libgmp.so.10
>> >>> >>>> >>> >
>> /usr/lib64/gcc/x86_64-suse-linux/10/../../../../x86_64-suse-linux/bin/ld:
>> >>> >>>> >>> > _ZN3NTL9zz_pEInfoE: TLS definition in
>> /usr/lib64/libntl.so.43 section .tbss
>> >>> >>>> >>> > mismatches non-TLS reference in
>> >>> >>>> >>> > /home/tobias/bin/sage-9.2/local/lib/libflint.so
>> >>> >>>> >>> >
>> /usr/lib64/gcc/x86_64-suse-linux/10/../../../../x86_64-suse-linux/bin/ld:
>> >>> >>>> >>> > /usr/lib64/libntl.so.43: error adding symbols: bad value
>> collect2: error:
>> >>> >>>> >>> > ld returned 1 exit status
>> >>> >>>> >>> > configure:17041: $? = 1
>> >>> >>>> >>> >
>> >>> >>>> >>> > configure: failed program was:
>> >>> >>>> >>> > | /* confdefs.h */
>> >>> >>>> >>> > | #define PACKAGE_NAME "pynac"
>> >>> >>>> >>> > | #define PACKAGE_TARNAME "pynac"
>> >>> >>>> >>> > | #define PACKAGE_VERSION "0.7.26.sage-2020-04-03"
>> >>> >>>> >>> > | #define PACKAGE_STRING "pynac 0.7.26.sage-2020-04-03"
>> >>> >>>> >>> > | #define PACKAGE_BUGREPORT "<pynac...@googlegroups.com>"
>> >>> >>>> >>> > | #define PACKAGE_URL ""
>> >>> >>>> >>> > | #define PACKAGE "pynac"
>> >>> >>>> >>> > | #define VERSION "0.7.26.sage-2020-04-03"
>> >>> >>>> >>> > | #define ARCHIVE_VERSION 3
>> >>> >>>> >>> > | #define ARCHIVE_AGE 0
>> >>> >>>> >>> > | #define STDC_HEADERS 1
>> >>> >>>> >>> > | #define HAVE_SYS_TYPES_H 1
>> >>> >>>> >>> > | #define HAVE_SYS_STAT_H 1
>> >>> >>>> >>> > | #define HAVE_STDLIB_H 1
>> >>> >>>> >>> > | #define HAVE_STRING_H 1
>> >>> >>>> >>> > | #define HAVE_MEMORY_H 1
>> >>> >>>> >>> > | #define HAVE_STRINGS_H 1
>> >>> >>>> >>> > | #define HAVE_INTTYPES_H 1
>> >>> >>>> >>> > | #define HAVE_STDINT_H 1
>> >>> >>>> >>> > | #define HAVE_UNISTD_H 1
>> >>> >>>> >>> > | #define HAVE_DLFCN_H 1
>> >>> >>>> >>> > | #define LT_OBJDIR ".libs/"
>> >>> >>>> >>> > | #define HAVE_GMP_H 1
>> >>> >>>> >>> > | #define HAVE_FLINT_FMPQ_POLY_H 1
>> >>> >>>> >>> > | /* end confdefs.h. */
>> >>> >>>> >>> > |
>> >>> >>>> >>> > | /* Override any GCC internal prototype to avoid an
>> error.
>> >>> >>>> >>> > |
>> >>> >>>> >>> > | Use char because int might match the return type of a
>> GCC
>> >>> >>>> >>> > | builtin and then its argument prototype would still
>> apply. */
>> >>> >>>> >>> > |
>> >>> >>>> >>> > | #ifdef __cplusplus
>> >>> >>>> >>> > | extern "C"
>> >>> >>>> >>> > | #endif
>> >>> >>>> >>> > | char fmpq_get_mpz_frac ();
>> >>> >>>> >>> > | int
>> >>> >>>> >>> > | main ()
>> >>> >>>> >>> > | {
>> >>> >>>> >>> > | return fmpq_get_mpz_frac ();
>> >>> >>>> >>> > |
>> >>> >>>> >>> > | ;
>> >>> >>>> >>> > | return 0;
>> >>> >>>> >>> > |
>> >>> >>>> >>> > | }
>> >>> >>>> >>> >
>> >>> >>>> >>> > configure:17058: result: no
>> >>> >>>> >>> > configure:17065: error: This package needs libflint
>> >>> >>>> >>>
>> >>> >>>> >>> or from file
>> >>> >>>> >>> > sage-9.2/logs/pkgs/pynac-0.7.26.sage-2020-04-03.p0.log
>> >>> >>>> >>>
>> >>> >>>> >>>
>> >>> >>>> >>> > checking for library containing __gmpz_get_str... -lgmp
>> >>> >>>> >>> > checking flint/fmpq_poly.h usability... yes
>> >>> >>>> >>> > checking flint/fmpq_poly.h presence... yes
>> >>> >>>> >>> > checking for flint/fmpq_poly.h... yes
>> >>> >>>> >>> > checking for library containing fmpq_get_mpz_frac... no
>> >>> >>>> >>> > configure: error: This package needs libflint
>> >>> >>>> >>> >
>> ****************************************************************************
>>
>> >>> >>>> >>> >
>> ****************************************************************************
>>
>> >>> >>>> >>> >
>> ************************************************************************
>> >>> >>>> >>> > Error configuring pynac-0.7.26.sage-2020-04-03.p0
>> >>> >>>> >>> > See the file
>> >>> >>>> >>> >
>> >>> >>>> >>> >
>> /home/tobias/bin/sage-9.2/local/var/tmp/sage/build/pynac-0.7.26.sage-202
>> >>> >>>> >>> > 0-04-03.p0/src/config.log>
>> >>> >>>> >>> > for details.
>> >>> >>>> >>> >
>> ****************************************************************************
>>
>> >>> >>>> >>> >
>> ****************************************************************************
>>
>> >>> >>>> >>> >
>> ************************************************************************
>> >>> >>>> >>>
>> >>> >>>> >>> --
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