I am trying to install sage on my PC with cygwin64 (running windows10) Install failed for GSL package. Have attached log file.
Is the right place to post this? Any solution for this problem? Could not find anything relevant in https://trac.sagemath.org/wiki/Cygwin64Port Thanks FG PS: Running cygwin64 on windows10 processor: Intel Core i3-6100 CPU @ 3.70 Ghz RAM: 8.00 GB system type: 64-bit operating system, x64-based processor -- You received this message because you are subscribed to the Google Groups "sage-support" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-support+unsubscr...@googlegroups.com. To post to this group, send email to sage-support@googlegroups.com. Visit this group at https://groups.google.com/group/sage-support. For more options, visit https://groups.google.com/d/optout.
Found local metadata for gsl-2.1.p1 Attempting to download package gsl-2.1.tar.gz from mirrors http://mirrors.mit.edu/sage/spkg/upstream/gsl/gsl-2.1.tar.gz [......................................................................] gsl-2.1.p1 ==================================================== Setting up build directory for gsl-2.1.p1 Finished extraction Applying patches from ../patches... Applying ../patches/gsl-2.1-gslcblas.patch patching file gsl.pc.in **************************************************** Host system: CYGWIN_NT-10.0 DESKTOP-I5D0STB 2.6.1(0.305/5/3) 2016-12-16 11:55 x86_64 Cygwin **************************************************** C compiler: gcc C compiler version: Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-pc-cygwin/5.4.0/lto-wrapper.exe Target: x86_64-pc-cygwin Configured with: /cygdrive/i/szsz/tmpp/gcc/gcc-5.4.0-1.x86_64/src/gcc-5.4.0/configure --srcdir=/cygdrive/i/szsz/tmpp/gcc/gcc-5.4.0-1.x86_64/src/gcc-5.4.0 --prefix=/usr --exec-prefix=/usr --localstatedir=/var --sysconfdir=/etc --docdir=/usr/share/doc/gcc --htmldir=/usr/share/doc/gcc/html -C --build=x86_64-pc-cygwin --host=x86_64-pc-cygwin --target=x86_64-pc-cygwin --without-libiconv-prefix --without-libintl-prefix --libexecdir=/usr/lib --enable-shared --enable-shared-libgcc --enable-static --enable-version-specific-runtime-libs --enable-bootstrap --enable-__cxa_atexit --with-dwarf2 --with-tune=generic --enable-languages=ada,c,c++,fortran,lto,objc,obj-c++ --enable-graphite --enable-threads=posix --enable-libatomic --enable-libcilkrts --enable-libgomp --enable-libitm --enable-libquadmath --enable-libquadmath-support --enable-libssp --enable-libada --enable-libgcj-sublibs --disable-java-awt --disable-symvers --with-ecj-jar=/usr/share/java/ecj.jar --with-gnu-ld --with-gnu-as --with-cloog-include=/usr/include/cloog-isl --without-libiconv-prefix --without-libintl-prefix --with-system-zlib --enable-linker-build-id --with-default-libstdcxx-abi=gcc4-compatible Thread model: posix gcc version 5.4.0 (GCC) **************************************************** Configuring GSL... checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for a sed that does not truncate output... /usr/bin/sed checking whether make sets $(MAKE)... (cached) yes checking build system type... x86_64-unknown-cygwin checking host system type... x86_64-unknown-cygwin checking for gcc... gcc checking whether the C compiler works... no configure: error: in `/home/Owner/sage/local/var/tmp/sage/build/gsl-2.1.p1/src': configure: error: C compiler cannot create executables See `config.log' for more details Error configuring GSL. real 0m10.281s user 0m0.693s sys 0m2.769s ************************************************************************ Error installing package gsl-2.1.p1 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the relevant part of the log file /home/Owner/sage/logs/pkgs/gsl-2.1.p1.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /home/Owner/sage/local/var/tmp/sage/build/gsl-2.1.p1 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/home/Owner/sage/local/var/tmp/sage/build/gsl-2.1.p1' && '/home/Owner/sage/sage' --sh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************ Found local metadata for gsl-2.1.p1 Using cached file /home/Owner/sage/upstream/gsl-2.1.tar.gz gsl-2.1.p1 ==================================================== Moving old directory gsl-2.1.p1 to /home/Owner/sage/local/var/tmp/sage/build/old... Setting up build directory for gsl-2.1.p1 Finished extraction Applying patches from ../patches... Applying ../patches/gsl-2.1-gslcblas.patch patching file gsl.pc.in **************************************************** Host system: CYGWIN_NT-10.0 DESKTOP-I5D0STB 2.6.1(0.305/5/3) 2016-12-16 11:55 x86_64 Cygwin **************************************************** C compiler: gcc C compiler version: Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-pc-cygwin/5.4.0/lto-wrapper.exe Target: x86_64-pc-cygwin Configured with: /cygdrive/i/szsz/tmpp/gcc/gcc-5.4.0-1.x86_64/src/gcc-5.4.0/configure --srcdir=/cygdrive/i/szsz/tmpp/gcc/gcc-5.4.0-1.x86_64/src/gcc-5.4.0 --prefix=/usr --exec-prefix=/usr --localstatedir=/var --sysconfdir=/etc --docdir=/usr/share/doc/gcc --htmldir=/usr/share/doc/gcc/html -C --build=x86_64-pc-cygwin --host=x86_64-pc-cygwin --target=x86_64-pc-cygwin --without-libiconv-prefix --without-libintl-prefix --libexecdir=/usr/lib --enable-shared --enable-shared-libgcc --enable-static --enable-version-specific-runtime-libs --enable-bootstrap --enable-__cxa_atexit --with-dwarf2 --with-tune=generic --enable-languages=ada,c,c++,fortran,lto,objc,obj-c++ --enable-graphite --enable-threads=posix --enable-libatomic --enable-libcilkrts --enable-libgomp --enable-libitm --enable-libquadmath --enable-libquadmath-support --enable-libssp --enable-libada --enable-libgcj-sublibs --disable-java-awt --disable-symvers --with-ecj-jar=/usr/share/java/ecj.jar --with-gnu-ld --with-gnu-as --with-cloog-include=/usr/include/cloog-isl --without-libiconv-prefix --without-libintl-prefix --with-system-zlib --enable-linker-build-id --with-default-libstdcxx-abi=gcc4-compatible Thread model: posix gcc version 5.4.0 (GCC) **************************************************** Configuring GSL... checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for a sed that does not truncate output... /usr/bin/sed checking whether make sets $(MAKE)... (cached) yes checking build system type... x86_64-unknown-cygwin checking host system type... x86_64-unknown-cygwin checking for gcc... gcc checking whether the C compiler works... no configure: error: in `/home/Owner/sage/local/var/tmp/sage/build/gsl-2.1.p1/src': configure: error: C compiler cannot create executables See `config.log' for more details Error configuring GSL. real 0m9.643s user 0m0.694s sys 0m2.501s ************************************************************************ Error installing package gsl-2.1.p1 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the relevant part of the log file /home/Owner/sage/logs/pkgs/gsl-2.1.p1.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /home/Owner/sage/local/var/tmp/sage/build/gsl-2.1.p1 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/home/Owner/sage/local/var/tmp/sage/build/gsl-2.1.p1' && '/home/Owner/sage/sage' --sh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************ Found local metadata for gsl-2.1.p1 Using cached file /home/Owner/sage/upstream/gsl-2.1.tar.gz gsl-2.1.p1 ==================================================== Moving old directory gsl-2.1.p1 to /home/Owner/sage/local/var/tmp/sage/build/old... Setting up build directory for gsl-2.1.p1 Finished extraction Applying patches from ../patches... Applying ../patches/gsl-2.1-gslcblas.patch patching file gsl.pc.in **************************************************** Host system: CYGWIN_NT-10.0 DESKTOP-I5D0STB 2.6.1(0.305/5/3) 2016-12-16 11:55 x86_64 Cygwin **************************************************** C compiler: gcc C compiler version: Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-pc-cygwin/5.4.0/lto-wrapper.exe Target: x86_64-pc-cygwin Configured with: /cygdrive/i/szsz/tmpp/gcc/gcc-5.4.0-1.x86_64/src/gcc-5.4.0/configure --srcdir=/cygdrive/i/szsz/tmpp/gcc/gcc-5.4.0-1.x86_64/src/gcc-5.4.0 --prefix=/usr --exec-prefix=/usr --localstatedir=/var --sysconfdir=/etc --docdir=/usr/share/doc/gcc --htmldir=/usr/share/doc/gcc/html -C --build=x86_64-pc-cygwin --host=x86_64-pc-cygwin --target=x86_64-pc-cygwin --without-libiconv-prefix --without-libintl-prefix --libexecdir=/usr/lib --enable-shared --enable-shared-libgcc --enable-static --enable-version-specific-runtime-libs --enable-bootstrap --enable-__cxa_atexit --with-dwarf2 --with-tune=generic --enable-languages=ada,c,c++,fortran,lto,objc,obj-c++ --enable-graphite --enable-threads=posix --enable-libatomic --enable-libcilkrts --enable-libgomp --enable-libitm --enable-libquadmath --enable-libquadmath-support --enable-libssp --enable-libada --enable-libgcj-sublibs --disable-java-awt --disable-symvers --with-ecj-jar=/usr/share/java/ecj.jar --with-gnu-ld --with-gnu-as --with-cloog-include=/usr/include/cloog-isl --without-libiconv-prefix --without-libintl-prefix --with-system-zlib --enable-linker-build-id --with-default-libstdcxx-abi=gcc4-compatible Thread model: posix gcc version 5.4.0 (GCC) **************************************************** Configuring GSL... checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for a sed that does not truncate output... /usr/bin/sed checking whether make sets $(MAKE)... (cached) yes checking build system type... x86_64-unknown-cygwin checking host system type... x86_64-unknown-cygwin checking for gcc... gcc checking whether the C compiler works... no configure: error: in `/home/Owner/sage/local/var/tmp/sage/build/gsl-2.1.p1/src': configure: error: C compiler cannot create executables See `config.log' for more details Error configuring GSL. real 0m11.860s user 0m0.497s sys 0m1.946s ************************************************************************ Error installing package gsl-2.1.p1 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the relevant part of the log file /home/Owner/sage/logs/pkgs/gsl-2.1.p1.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /home/Owner/sage/local/var/tmp/sage/build/gsl-2.1.p1 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/home/Owner/sage/local/var/tmp/sage/build/gsl-2.1.p1' && '/home/Owner/sage/sage' --sh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************ Found local metadata for gsl-2.1.p1 Using cached file /home/Owner/sage/upstream/gsl-2.1.tar.gz gsl-2.1.p1 ==================================================== Moving old directory gsl-2.1.p1 to /home/Owner/sage/local/var/tmp/sage/build/old... Setting up build directory for gsl-2.1.p1 Finished extraction Applying patches from ../patches... Applying ../patches/gsl-2.1-gslcblas.patch patching file gsl.pc.in **************************************************** Host system: CYGWIN_NT-10.0 DESKTOP-I5D0STB 2.6.1(0.305/5/3) 2016-12-16 11:55 x86_64 Cygwin **************************************************** C compiler: gcc C compiler version: Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-pc-cygwin/5.4.0/lto-wrapper.exe Target: x86_64-pc-cygwin Configured with: /cygdrive/i/szsz/tmpp/gcc/gcc-5.4.0-1.x86_64/src/gcc-5.4.0/configure --srcdir=/cygdrive/i/szsz/tmpp/gcc/gcc-5.4.0-1.x86_64/src/gcc-5.4.0 --prefix=/usr --exec-prefix=/usr --localstatedir=/var --sysconfdir=/etc --docdir=/usr/share/doc/gcc --htmldir=/usr/share/doc/gcc/html -C --build=x86_64-pc-cygwin --host=x86_64-pc-cygwin --target=x86_64-pc-cygwin --without-libiconv-prefix --without-libintl-prefix --libexecdir=/usr/lib --enable-shared --enable-shared-libgcc --enable-static --enable-version-specific-runtime-libs --enable-bootstrap --enable-__cxa_atexit --with-dwarf2 --with-tune=generic --enable-languages=ada,c,c++,fortran,lto,objc,obj-c++ --enable-graphite --enable-threads=posix --enable-libatomic --enable-libcilkrts --enable-libgomp --enable-libitm --enable-libquadmath --enable-libquadmath-support --enable-libssp --enable-libada --enable-libgcj-sublibs --disable-java-awt --disable-symvers --with-ecj-jar=/usr/share/java/ecj.jar --with-gnu-ld --with-gnu-as --with-cloog-include=/usr/include/cloog-isl --without-libiconv-prefix --without-libintl-prefix --with-system-zlib --enable-linker-build-id --with-default-libstdcxx-abi=gcc4-compatible Thread model: posix gcc version 5.4.0 (GCC) **************************************************** Configuring GSL... checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for a sed that does not truncate output... /usr/bin/sed checking whether make sets $(MAKE)... (cached) yes checking build system type... x86_64-unknown-cygwin checking host system type... x86_64-unknown-cygwin checking for gcc... gcc checking whether the C compiler works... no configure: error: in `/home/Owner/sage/local/var/tmp/sage/build/gsl-2.1.p1/src': configure: error: C compiler cannot create executables See `config.log' for more details Error configuring GSL. real 0m11.234s user 0m0.470s sys 0m1.826s ************************************************************************ Error installing package gsl-2.1.p1 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the relevant part of the log file /home/Owner/sage/logs/pkgs/gsl-2.1.p1.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /home/Owner/sage/local/var/tmp/sage/build/gsl-2.1.p1 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/home/Owner/sage/local/var/tmp/sage/build/gsl-2.1.p1' && '/home/Owner/sage/sage' --sh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************
