A nice little puzzle for Sage's R users trying to use R 3.3.1 (forthcoming in Trac#20523 <https://trac.sagemath.org/ticket/20523>) : the (still damnably useful, notwithstanding rstan) rjags package no longer installs.
rjags calls the system's jags binary and system's jags modules (compiled as .so objects in Unix). However, there is currently (i. e. sage 7.4 beta4) a conflict between the system's and Sage's notion of what BLAS should do : my (Debian) system's BLAS wants to use a gotoblas function, not found in what Sage uses for BLAS. A possible workaround is to install a Sage-specific version of JAGS from the source, configured with something like "./configure --prefix=$SAGE_ROOT/local") in a Sage shell (and compiled and installed in the Sage shell...). This worked like a charm for me. I do not know Sage's build system well enough to know if forcing Sage to use system's numerical livraries (by forcing, e. g. to use the local ATLAS libraries) should be enough. HTH, -- Emmanuel Charpentier -- You received this message because you are subscribed to the Google Groups "sage-support" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-support+unsubscr...@googlegroups.com. To post to this group, send email to sage-support@googlegroups.com. Visit this group at https://groups.google.com/group/sage-support. For more options, visit https://groups.google.com/d/optout.
