Hi Maarten!
Hi John!
1) My cpp executable is in /lib64/ not in /lib/, and links to /usr/
bin/cpp
Maybe this is the error. If you know how to solve it, please,
tell me step by step how to do it. Thanks!
2) Yes, the file is SAGE_ROOT/spkg/build/prereq-0.9/config.log
Here is the content:
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by Sage configure x.y.z, which was
generated by GNU Autoconf 2.68. Invocation command line was
$ ./configure
## --------- ##
## Platform. ##
## --------- ##
hostname = computer
uname -m = x86_64
uname -r = 2.6.37.6
uname -s = Linux
uname -v = #1 SMP Wed Mar 30 15:28:53 EEST 2011
/usr/bin/uname -p = unknown
/bin/uname -X = unknown
/bin/arch = x86_64
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = unknown
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /home/name/Applications/sage-4.7.1
PATH: /home/name/Applications/sage-4.7.1/local/bin
PATH: /usr/local/bin
PATH: /usr/local/sbin
PATH: /usr/bin
PATH: /usr/sbin
PATH: /bin
PATH: /sbin
PATH: /opt/bin
PATH: /opt/sun-jre/bin
## ----------- ##
## Core tests. ##
## ----------- ##
configure:2341: checking for a BSD-compatible install
configure:2409: result: /usr/bin/install -c
configure:2420: checking whether build environment is sane
configure:2470: result: yes
configure:2611: checking for a thread-safe mkdir -p
configure:2650: result: /bin/mkdir -p
configure:2663: checking for gawk
configure:2679: found /bin/gawk
configure:2690: result: gawk
configure:2701: checking whether make sets $(MAKE)
configure:2723: result: yes
configure:2815: checking build system type
configure:2829: result: x86_64-unknown-linux-gnu
configure:2849: checking host system type
configure:2862: result: x86_64-unknown-linux-gnu
configure:2948: checking for gcc
configure:2964: found /usr/bin/gcc
configure:2975: result: gcc
configure:3204: checking for C compiler version
configure:3213: gcc --version >&5
gcc (Pardus Linux) 4.5.3
Copyright (C) 2010 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There
is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR
PURPOSE.
configure:3224: $? = 0
configure:3213: gcc -v >&5
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/lto-wrapper
Target: x86_64-pc-linux-gnu
Configured with: ../configure --prefix=/usr --bindir=/usr/bin --
libdir=/usr/lib
--libexecdir=/usr/lib --includedir=/usr/include --mandir=/usr/share/
man
--infodir=/usr/share/info --with-gxx-include-dir=/usr/include/c++
--build=x86_64-pc-linux-gnu --disable-libgcj --disable-nls --disable-
mudflap
--disable-libmudflap --disable-libunwind-exceptions --enable-
checking=release
--enable-clocale=gnu --enable-__cxa_atexit
--enable-languages=c,c++,fortran,objc,obj-c++,lto
--enable-libstdcxx-allocator=new --disable-libstdcxx-pch --enable-
shared
--enable-ssp --disable-libssp --enable-plugin --enable-threads=posix
--without-included-gettext --with-arch_32=i686 --with-system-libunwind
--enable-multilib --with-tune=generic --with-system-zlib --with-
tune=generic
--with-pkgversion='Pardus Linux' --with-bugurl=http://
bugs.pardus.org.tr
Thread model: posix
gcc version 4.5.3 (Pardus Linux)
configure:3224: $? = 0
configure:3213: gcc -V >&5
gcc: '-V' option must have argument
configure:3224: $? = 1
configure:3213: gcc -qversion >&5
gcc: unrecognized option '-qversion'
gcc: no input files
configure:3224: $? = 1
configure:3244: checking whether the C compiler works
configure:3266: gcc conftest.c >&5
configure:3270: $? = 0
configure:3318: result: yes
configure:3321: checking for C compiler default output file name
configure:3323: result: a.out
configure:3329: checking for suffix of executables
configure:3336: gcc -o conftest conftest.c >&5
configure:3340: $? = 0
configure:3362: result:
configure:3384: checking whether we are cross compiling
configure:3392: gcc -o conftest conftest.c >&5
configure:3396: $? = 0
configure:3403: ./conftest
configure:3407: $? = 0
configure:3422: result: no
configure:3427: checking for suffix of object files
configure:3449: gcc -c conftest.c >&5
configure:3453: $? = 0
configure:3474: result: o
configure:3478: checking whether we are using the GNU C compiler
configure:3497: gcc -c conftest.c >&5
configure:3497: $? = 0
configure:3506: result: yes
configure:3515: checking whether gcc accepts -g
configure:3535: gcc -c -g conftest.c >&5
configure:3535: $? = 0
configure:3576: result: yes
configure:3593: checking for gcc option to accept ISO C89
configure:3657: gcc -c -g -O2 conftest.c >&5
configure:3657: $? = 0
configure:3670: result: none needed
configure:3701: checking for style of include used by make
configure:3729: result: GNU
configure:3754: checking dependency style of gcc
configure:3864: result: gcc3
configure:3937: checking for g++
configure:3953: found /usr/bin/g++
configure:3964: result: g++
configure:3991: checking for C++ compiler version
configure:4000: g++ --version >&5
g++ (Pardus Linux) 4.5.3
Copyright (C) 2010 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There
is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR
PURPOSE.
configure:4011: $? = 0
configure:4000: g++ -v >&5
Using built-in specs.
COLLECT_GCC=g++
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/lto-wrapper
Target: x86_64-pc-linux-gnu
Configured with: ../configure --prefix=/usr --bindir=/usr/bin --
libdir=/usr/lib
--libexecdir=/usr/lib --includedir=/usr/include --mandir=/usr/share/
man
--infodir=/usr/share/info --with-gxx-include-dir=/usr/include/c++
--build=x86_64-pc-linux-gnu --disable-libgcj --disable-nls --disable-
mudflap
--disable-libmudflap --disable-libunwind-exceptions --enable-
checking=release
--enable-clocale=gnu --enable-__cxa_atexit
--enable-languages=c,c++,fortran,objc,obj-c++,lto
--enable-libstdcxx-allocator=new --disable-libstdcxx-pch --enable-
shared
--enable-ssp --disable-libssp --enable-plugin --enable-threads=posix
--without-included-gettext --with-arch_32=i686 --with-system-libunwind
--enable-multilib --with-tune=generic --with-system-zlib --with-
tune=generic
--with-pkgversion='Pardus Linux' --with-bugurl=http://
bugs.pardus.org.tr
Thread model: posix
gcc version 4.5.3 (Pardus Linux)
configure:4011: $? = 0
configure:4000: g++ -V >&5
g++: '-V' option must have argument
configure:4011: $? = 1
configure:4000: g++ -qversion >&5
g++: unrecognized option '-qversion'
g++: no input files
configure:4011: $? = 1
configure:4015: checking whether we are using the GNU C++ compiler
configure:4034: g++ -c conftest.cpp >&5
configure:4034: $? = 0
configure:4043: result: yes
configure:4052: checking whether g++ accepts -g
configure:4072: g++ -c -g conftest.cpp >&5
configure:4072: $? = 0
configure:4113: result: yes
configure:4138: checking dependency style of g++
configure:4248: result: gcc3
configure:4268: checking how to run the C preprocessor
configure:4299: gcc -E conftest.c
In file included from /usr/include/bits/posix1_lim.h:157:0,
from /usr/include/limits.h:145,
from
/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/include/limits.h:169,
from
/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/include/syslimits.h:7,
from
/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/include/limits.h:34,
from conftest.c:12:
/usr/include/bits/local_lim.h:39:26: fatal error: linux/limits.h: No
such file
or directory
compilation terminated.
configure:4299: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "Sage"
| #define PACKAGE_TARNAME "sage"
| #define PACKAGE_VERSION "x.y.z"
| #define PACKAGE_STRING "Sage x.y.z"
| #define PACKAGE_BUGREPORT "sage-de...@googlegroups.com"
| #define PACKAGE_URL ""
| #define PACKAGE "sage"
| #define VERSION "x.y.z"
| /* end confdefs.h. */
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| Syntax error
configure:4299: gcc -E conftest.c
In file included from /usr/include/bits/posix1_lim.h:157:0,
from /usr/include/limits.h:145,
from
/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/include/limits.h:169,
from
/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/include/syslimits.h:7,
from
/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/include/limits.h:34,
from conftest.c:12:
/usr/include/bits/local_lim.h:39:26: fatal error: linux/limits.h: No
such file
or directory
compilation terminated.
configure:4299: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "Sage"
| #define PACKAGE_TARNAME "sage"
| #define PACKAGE_VERSION "x.y.z"
| #define PACKAGE_STRING "Sage x.y.z"
| #define PACKAGE_BUGREPORT "sage-de...@googlegroups.com"
| #define PACKAGE_URL ""
| #define PACKAGE "sage"
| #define VERSION "x.y.z"
| /* end confdefs.h. */
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| Syntax error
configure:4299: gcc -E -traditional-cpp conftest.c
In file included from /usr/include/features.h:362:0,
from /usr/include/assert.h:38,
from conftest.c:15:
/usr/include/sys/cdefs.h:32:3: error: #error "You need a ISO C
conforming
compiler to use the glibc headers"
*** 1 errors, 0 warnings
configure:4299: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "Sage"
| #define PACKAGE_TARNAME "sage"
| #define PACKAGE_VERSION "x.y.z"
| #define PACKAGE_STRING "Sage x.y.z"
| #define PACKAGE_BUGREPORT "sage-de...@googlegroups.com"
| #define PACKAGE_URL ""
| #define PACKAGE "sage"
| #define VERSION "x.y.z"
| /* end confdefs.h. */
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| Syntax error
configure:4299: gcc -E -traditional-cpp conftest.c
In file included from /usr/include/features.h:362:0,
from /usr/include/assert.h:38,
from conftest.c:15:
/usr/include/sys/cdefs.h:32:3: error: #error "You need a ISO C
conforming
compiler to use the glibc headers"
*** 1 errors, 0 warnings
configure:4299: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "Sage"
| #define PACKAGE_TARNAME "sage"
| #define PACKAGE_VERSION "x.y.z"
| #define PACKAGE_STRING "Sage x.y.z"
| #define PACKAGE_BUGREPORT "sage-de...@googlegroups.com"
| #define PACKAGE_URL ""
| #define PACKAGE "sage"
| #define VERSION "x.y.z"
| /* end confdefs.h. */
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| Syntax error
configure:4299: /lib/cpp conftest.c
In file included from /usr/include/bits/posix1_lim.h:157:0,
from /usr/include/limits.h:145,
from
/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/include/limits.h:169,
from
/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/include/syslimits.h:7,
from
/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/include/limits.h:34,
from conftest.c:12:
/usr/include/bits/local_lim.h:39:26: fatal error: linux/limits.h: No
such file
or directory
compilation terminated.
configure:4299: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "Sage"
| #define PACKAGE_TARNAME "sage"
| #define PACKAGE_VERSION "x.y.z"
| #define PACKAGE_STRING "Sage x.y.z"
| #define PACKAGE_BUGREPORT "sage-de...@googlegroups.com"
| #define PACKAGE_URL ""
| #define PACKAGE "sage"
| #define VERSION "x.y.z"
| /* end confdefs.h. */
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| Syntax error
configure:4299: /lib/cpp conftest.c
In file included from /usr/include/bits/posix1_lim.h:157:0,
from /usr/include/limits.h:145,
from
/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/include/limits.h:169,
from
/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/include/syslimits.h:7,
from
/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/include/limits.h:34,
from conftest.c:12:
/usr/include/bits/local_lim.h:39:26: fatal error: linux/limits.h: No
such file
or directory
compilation terminated.
configure:4299: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "Sage"
| #define PACKAGE_TARNAME "sage"
| #define PACKAGE_VERSION "x.y.z"
| #define PACKAGE_STRING "Sage x.y.z"
| #define PACKAGE_BUGREPORT "sage-de...@googlegroups.com"
| #define PACKAGE_URL ""
| #define PACKAGE "sage"
| #define VERSION "x.y.z"
| /* end confdefs.h. */
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| Syntax error
configure:4338: result: /lib/cpp
configure:4358: /lib/cpp conftest.c
In file included from /usr/include/bits/posix1_lim.h:157:0,
from /usr/include/limits.h:145,
from
/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/include/limits.h:169,
from
/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/include/syslimits.h:7,
from
/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/include/limits.h:34,
from conftest.c:12:
/usr/include/bits/local_lim.h:39:26: fatal error: linux/limits.h: No
such file
or directory
compilation terminated.
configure:4358: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "Sage"
| #define PACKAGE_TARNAME "sage"
| #define PACKAGE_VERSION "x.y.z"
| #define PACKAGE_STRING "Sage x.y.z"
| #define PACKAGE_BUGREPORT "sage-de...@googlegroups.com"
| #define PACKAGE_URL ""
| #define PACKAGE "sage"
| #define VERSION "x.y.z"
| /* end confdefs.h. */
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| Syntax error
configure:4358: /lib/cpp conftest.c
In file included from /usr/include/bits/posix1_lim.h:157:0,
from /usr/include/limits.h:145,
from
/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/include/limits.h:169,
from
/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/include/syslimits.h:7,
from
/usr/lib/gcc/x86_64-pc-linux-gnu/4.5.3/include/limits.h:34,
from conftest.c:12:
/usr/include/bits/local_lim.h:39:26: fatal error: linux/limits.h: No
such file
or directory
compilation terminated.
configure:4358: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "Sage"
| #define PACKAGE_TARNAME "sage"
| #define PACKAGE_VERSION "x.y.z"
| #define PACKAGE_STRING "Sage x.y.z"
| #define PACKAGE_BUGREPORT "sage-de...@googlegroups.com"
| #define PACKAGE_URL ""
| #define PACKAGE "sage"
| #define VERSION "x.y.z"
| /* end confdefs.h. */
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
| Syntax error
configure:4388: error: in
`/home/name/Applications/sage-4.7.1/spkg/build/prereq-0.9':
configure:4390: error: C preprocessor "/lib/cpp" fails sanity check
See `config.log' for more details
## ---------------- ##
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## ---------------- ##
ac_cv_build=x86_64-unknown-linux-gnu
ac_cv_c_compiler_gnu=yes
ac_cv_cxx_compiler_gnu=yes
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=
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ac_cv_env_CFLAGS_set=
ac_cv_env_CFLAGS_value=
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
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ac_cv_env_CXXCPP_set=
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ac_cv_env_FC_set=
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ac_cv_env_LDFLAGS_set=
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ac_cv_env_LIBS_set=
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ac_cv_env_SAGE_FORTRAN_LIB_set=
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am_cv_CXX_dependencies_compiler_type=gcc3
## ----------------- ##
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AMDEPBACKSLASH='\'
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AUTOMAKE='${SHELL}
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mandir='${datarootdir}/man'
mkdir_p='/bin/mkdir -p'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='NONE'
program_transform_name='s,x,x,'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
sysconfdir='${prefix}/etc'
target_alias=''
## ----------- ##
## confdefs.h. ##
## ----------- ##
/* confdefs.h */
#define PACKAGE_NAME "Sage"
#define PACKAGE_TARNAME "sage"
#define PACKAGE_VERSION "x.y.z"
#define PACKAGE_STRING "Sage x.y.z"
#define PACKAGE_BUGREPORT "sage-de...@googlegroups.com"
#define PACKAGE_URL ""
#define PACKAGE "sage"
#define VERSION "x.y.z"
configure: exit 1
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