With some fiddling,

\sageplot{Graph(d).plot(), axes_pad=0.1)

works around the problem.

On Mar 19, 6:50 pm, pong <wypon...@gmail.com> wrote:
> Sage plots some graphs with vertices partially chopped off.
> For example:
>
> sage: d={1:[2,3,5], 2:[3], 3:[4,5], 4:[5]}
> sage: Graph(d).plot()
>
> I thought the bug was fixed, but looks like it still exists.
> There is a work around using something like G.show(axes_pad=0.1).
> However, I couldn't make it works with sagetex because axes_pad seems
> to have no effect on G.plot().
>
> Any help?
> Thanks in advance

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