No offense but all of your examples would be a _lot_ easier with
biopython, which is a pretty mature and well-tested codebase for doing
all sorts of bioinformatics in python.  I really recommend you look at
its tutorial if you haven't yet:

http://biopython.org/DIST/docs/tutorial/Tutorial.html

cheers,
Marshall Hampton

On Nov 30, 2:26 pm, "biotic.computer" <biotic.compu...@gmail.com>
wrote:
> You can also do analysis without using any python library look at this
> example on:http://bioticcomputer.blogspot.com/

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