I manually set those CVXOPT_... variables in the spkg-install file for now and building cvxopt then succeeded.
Building Sage now almost completes, but the file src/sage/libs/readline.pyx fails to compile with these errors: [1/1] gcc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wno-unused -I./sage/cpython -Isage/cpython -I/Applications/SageMath/local/include -I/Applications/SageMath/src -I/Applications/SageMath/src/sage/ext -I/Applications/SageMath/local/include/python3.7m -I/Applications/SageMath/local/lib/python3.7/site-packages/numpy/core/include -Ibuild/cythonized -I/Applications/SageMath/local/include/python3.7m -c build/cythonized/sage/libs/readline.c -o build/temp.macosx-10.9-x86_64-3.7/build/cythonized/sage/libs/readline.o -fno-strict-aliasing -DCYTHON_CLINE_IN_TRACEBACK=1 -std=c99 build/cythonized/sage/libs/readline.c:1446:36: error: use of undeclared identifier 'rl_catch_signals' __pyx_t_1 = __Pyx_PyInt_From_int(rl_catch_signals); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 87, __pyx_L1_error) ^ build/cythonized/sage/libs/readline.c:1468:36: error: use of undeclared identifier 'rl_catch_sigwinch' __pyx_t_1 = __Pyx_PyInt_From_int(rl_catch_sigwinch); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 88, __pyx_L1_error) ^ build/cythonized/sage/libs/readline.c:1542:36: warning: implicit declaration of function 'rl_set_signals' is invalid in C99 [-Wimplicit-function-declaration] __pyx_t_1 = __Pyx_PyInt_From_int(rl_set_signals()); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 104, __pyx_L1_error) ^ build/cythonized/sage/libs/readline.c:1604:36: warning: implicit declaration of function 'rl_clear_signals' is invalid in C99 [-Wimplicit-function-declaration] __pyx_t_1 = __Pyx_PyInt_From_int(rl_clear_signals()); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 120, __pyx_L1_error) ^ build/cythonized/sage/libs/readline.c:1849:36: error: passing 'void' to parameter of incompatible type 'int' __pyx_t_1 = __Pyx_PyInt_From_int(rl_forced_update_display()); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 190, __pyx_L1_error) ^~~~~~~~~~~~~~~~~~~~~~~~~~ ... The Homebrew readline is version 8.0.1. In particular, the header file `/usr/local/opt/readline/include/readline/readline.h` does contain `rl_catch_signals`, `rl_catch_sigwinch` and `rl_clear_signals`. The system readline in `/usr/include/readline/readline.h` does not contain these though, so it looks like that is used instead. > Am 12.01.2020 um 10:58 schrieb Dima Pasechnik <dimp...@gmail.com>: > > On Sun, Jan 12, 2020 at 12:10 AM Markus Wageringel > <markus.wagerin...@gmail.com <mailto:markus.wagerin...@gmail.com>> wrote: >> >> On macOS 10.13.6, trying to make use of #27870 using Homebrew's openblas, >> the build fails for me at cvxopt: >> >> gcc -bundle -undefined dynamic_lookup -L/Applications/SageMath/local/lib >> -Wl,-rpath,/Applications/SageMath/local/lib -L/usr/local/opt/openssl/lib -L. >> -L/Applications/SageMath/local/lib >> -Wl,-rpath,/Applications/SageMath/local/lib -L/usr/local/opt/openssl/lib >> -L/Applications/SageMath/local/lib >> -Wl,-rpath,/Applications/SageMath/local/lib >> build/temp.macosx-10.9-x86_64-3.7/src/C/gsl.o -L/Applications/SageMath/local >> -L/Applications/SageMath/local -L/Applications/SageMath/local/lib -lm -lgsl >> -lopenblas -o >> build/lib.macosx-10.9-x86_64-3.7/cvxopt/gsl.cpython-37m-darwin.so >> ld: library not found for -lopenblas >> clang: error: linker command failed with exit code 1 (use -v to see >> invocation) >> error: command 'gcc' failed with exit status 1 >> Running setup.py install for cvxopt: finished with status 'error' >> >> As openblas and readline are keg-only, I ran configure as >> >> ./configure \ >> LDFLAGS="-L/usr/local/opt/readline/lib -L/usr/local/opt/openblas/lib >> -L/usr/local/opt/mpfr/lib" \ >> CPPFLAGS="-I/usr/local/opt/readline/include >> -I/usr/local/opt/openblas/include" \ >> >> PKG_CONFIG_PATH="/usr/local/opt/readline/lib/pkgconfig:/usr/local/opt/openblas/lib/pkgconfig" >> >> but cvxopt does not seem to use this. > > cvxopt really needs env.vars CVXOPT_BLAS_LIB_DIR, CVXOPT_BLAS_LIB, > CVXOPT_LAPACK_LIB set, it does not use pkgconf. > (but it should). > We can propose an upstream fix for this, and meanwhile set these vars > in spkg-install -- You received this message because you are subscribed to the Google Groups "sage-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-devel+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-devel/BBB346E3-DBD1-44B4-AD7A-5D4B0B9D1BF5%40gmail.com.