Ok, so I have installed the gfortran manually. And I have re-run the make command. Now, it is the fplll that is giving me problems. (see log attached) I am not sure how to deal with the error 'virtual memory exhausted' I have 512MB of swap and 4 G of ram. I am not quite sure how to proceed
On Saturday, August 11, 2018 at 11:23:21 PM UTC+8, Will Sinclair wrote: > > Hi Guys, > I tried to install sage on my CentOS 7 server and simply cloned the whole > source from github into a new directory i made: /sagemath and I simply > entered the command 'make'. It took about 20 minutes of compiling and ended > up at here: > Error building Sage. > > The following package(s) may have failed to build (not necessarily > during this run of 'make all-start'): > > * package: gfortran-7.2.0 > log file: /home/yuhengw/sagemath/sage/logs/pkgs/gfortran-7.2.0.log > build directory: > /home/yuhengw/sagemath/sage/local/var/tmp/sage/build/gfortran-7.2.0 > > The build directory may contain configuration files and other potentially > helpful information. WARNING: if you now run 'make' again, the build > directory will, by default, be deleted. Set the environment variable > SAGE_KEEP_BUILT_SPKGS to 'yes' to prevent this. > > I am quite new to all of this, any help would be greatly appreciated! > > Thanks > p.s. see the log attached > -- You received this message because you are subscribed to the Google Groups "sage-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-devel+unsubscr...@googlegroups.com. To post to this group, send email to sage-devel@googlegroups.com. Visit this group at https://groups.google.com/group/sage-devel. For more options, visit https://groups.google.com/d/optout.
Found local metadata for fplll-5.2.1 Attempting to download package fplll-5.2.1.tar.gz from mirrors http://mirrors.xmission.com/sage/spkg/upstream/fplll/fplll-5.2.1.tar.gz [......................................................................] fplll-5.2.1 ==================================================== Setting up build directory for fplll-5.2.1 Finished extraction No patch files found in ../patches **************************************************** Host system: Linux server 2.6.32-042stab127.2 #1 SMP Thu Jan 4 16:41:44 MSK 2018 x86_64 x86_64 x86_64 GNU/Linux **************************************************** C compiler: gcc C compiler version: Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-28) (GCC) **************************************************** No record that 'fplll' was ever installed; skipping uninstall Configuring fplll-5.2.1 checking for a BSD-compatible install... /bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking how to print strings... printf checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... ld checking if the linker (ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /bin/nm -B checking the name lister (/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1966080 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /bin/nm -B output from gcc object... ok checking for sysroot... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... ld -m elf_x86_64 checking if the linker (ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) gcc3 checking whether make sets $(MAKE)... (cached) yes checking whether g++ supports C++11 features by default... no checking whether g++ supports C++11 features with -std=c++11... yes checking for __gmpz_init in -lgmp... yes checking for __gmp_get_memory_functions in -lgmp... yes checking for mpfr_add in -lmpfr... yes checking for mpfr_fms in -lmpfr... yes checking qd/dd_real.h usability... no checking qd/dd_real.h presence... no checking for qd/dd_real.h... no checking for ANSI C header files... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking cstdio usability... yes checking cstdio presence... yes checking for cstdio... yes checking iostream usability... yes checking iostream presence... yes checking for iostream... yes checking string usability... yes checking string presence... yes checking for string... yes checking limits usability... yes checking limits presence... yes checking for limits... yes checking vector usability... yes checking vector presence... yes checking for vector... yes checking for stdbool.h that conforms to C99... yes checking for _Bool... no checking for an ANSI C-conforming const... yes checking for inline... inline checking for size_t... yes checking for working volatile... yes checking for working strtod... yes checking for floor... yes checking for pow... yes checking for rint... yes checking for sqrt... yes checking for strtol... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating fplll/Makefile config.status: creating tests/Makefile config.status: creating fplll.pc config.status: creating config.h config.status: creating fplll/fplll_config.h config.status: executing depfiles commands config.status: executing libtool commands Building fplll-5.2.1 make[4]: Entering directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src' make all-recursive make[5]: Entering directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src' Making all in fplll make[6]: Entering directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src/fplll' make all-am make[7]: Entering directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src/fplll' depbase=`echo fplll.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT fplll.lo -MD -MP -MF $depbase.Tpo -c -o fplll.lo fplll.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT fplll.lo -MD -MP -MF .deps/fplll.Tpo -c fplll.cpp -fPIC -DPIC -o .libs/fplll.o libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT fplll.lo -MD -MP -MF .deps/fplll.Tpo -c fplll.cpp -o fplll.o >/dev/null 2>&1 depbase=`echo util.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT util.lo -MD -MP -MF $depbase.Tpo -c -o util.lo util.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT util.lo -MD -MP -MF .deps/util.Tpo -c util.cpp -fPIC -DPIC -o .libs/util.o libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT util.lo -MD -MP -MF .deps/util.Tpo -c util.cpp -o util.o >/dev/null 2>&1 depbase=`echo enum/topenum.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/topenum.lo -MD -MP -MF $depbase.Tpo -c -o enum/topenum.lo enum/topenum.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/topenum.lo -MD -MP -MF enum/.deps/topenum.Tpo -c enum/topenum.cpp -fPIC -DPIC -o enum/.libs/topenum.o libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/topenum.lo -MD -MP -MF enum/.deps/topenum.Tpo -c enum/topenum.cpp -o enum/topenum.o >/dev/null 2>&1 depbase=`echo enum/enumerate.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate.lo -MD -MP -MF $depbase.Tpo -c -o enum/enumerate.lo enum/enumerate.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate.lo -MD -MP -MF enum/.deps/enumerate.Tpo -c enum/enumerate.cpp -fPIC -DPIC -o enum/.libs/enumerate.o libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate.lo -MD -MP -MF enum/.deps/enumerate.Tpo -c enum/enumerate.cpp -o enum/enumerate.o >/dev/null 2>&1 depbase=`echo enum/enumerate_base.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate_base.lo -MD -MP -MF $depbase.Tpo -c -o enum/enumerate_base.lo enum/enumerate_base.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate_base.lo -MD -MP -MF enum/.deps/enumerate_base.Tpo -c enum/enumerate_base.cpp -fPIC -DPIC -o enum/.libs/enumerate_base.o virtual memory exhausted: Cannot allocate memory make[7]: *** [enum/enumerate_base.lo] Error 1 make[7]: Leaving directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src/fplll' make[6]: *** [all] Error 2 make[6]: Leaving directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src/fplll' make[5]: *** [all-recursive] Error 1 make[5]: Leaving directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src' make[4]: *** [all] Error 2 make[4]: Leaving directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src' ******************************************************************************** Error building fplll-5.2.1 ******************************************************************************** real 0m45.680s user 0m38.394s sys 0m5.569s ************************************************************************ Error installing package fplll-5.2.1 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the log file /home/yuhengw/sage/logs/pkgs/fplll-5.2.1.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1' && '/home/yuhengw/sage/sage' --sh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************ Found local metadata for fplll-5.2.1 Using cached file /home/yuhengw/sage/upstream/fplll-5.2.1.tar.gz fplll-5.2.1 ==================================================== Setting up build directory for fplll-5.2.1 Finished extraction No patch files found in ../patches **************************************************** Host system: Linux server 2.6.32-042stab127.2 #1 SMP Thu Jan 4 16:41:44 MSK 2018 x86_64 x86_64 x86_64 GNU/Linux **************************************************** C compiler: gcc C compiler version: Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-28) (GCC) **************************************************** No record that 'fplll' was ever installed; skipping uninstall Configuring fplll-5.2.1 checking for a BSD-compatible install... /bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking how to print strings... printf checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... ld checking if the linker (ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /bin/nm -B checking the name lister (/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1966080 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /bin/nm -B output from gcc object... ok checking for sysroot... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... ld -m elf_x86_64 checking if the linker (ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) gcc3 checking whether make sets $(MAKE)... (cached) yes checking whether g++ supports C++11 features by default... no checking whether g++ supports C++11 features with -std=c++11... yes checking for __gmpz_init in -lgmp... yes checking for __gmp_get_memory_functions in -lgmp... yes checking for mpfr_add in -lmpfr... yes checking for mpfr_fms in -lmpfr... yes checking qd/dd_real.h usability... no checking qd/dd_real.h presence... no checking for qd/dd_real.h... no checking for ANSI C header files... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking cstdio usability... yes checking cstdio presence... yes checking for cstdio... yes checking iostream usability... yes checking iostream presence... yes checking for iostream... yes checking string usability... yes checking string presence... yes checking for string... yes checking limits usability... yes checking limits presence... yes checking for limits... yes checking vector usability... yes checking vector presence... yes checking for vector... yes checking for stdbool.h that conforms to C99... yes checking for _Bool... no checking for an ANSI C-conforming const... yes checking for inline... inline checking for size_t... yes checking for working volatile... yes checking for working strtod... yes checking for floor... yes checking for pow... yes checking for rint... yes checking for sqrt... yes checking for strtol... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating fplll/Makefile config.status: creating tests/Makefile config.status: creating fplll.pc config.status: creating config.h config.status: creating fplll/fplll_config.h config.status: executing depfiles commands config.status: executing libtool commands Building fplll-5.2.1 make[4]: Entering directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src' make all-recursive make[5]: Entering directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src' Making all in fplll make[6]: Entering directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src/fplll' make all-am make[7]: Entering directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src/fplll' depbase=`echo fplll.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT fplll.lo -MD -MP -MF $depbase.Tpo -c -o fplll.lo fplll.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT fplll.lo -MD -MP -MF .deps/fplll.Tpo -c fplll.cpp -fPIC -DPIC -o .libs/fplll.o libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT fplll.lo -MD -MP -MF .deps/fplll.Tpo -c fplll.cpp -o fplll.o >/dev/null 2>&1 depbase=`echo util.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT util.lo -MD -MP -MF $depbase.Tpo -c -o util.lo util.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT util.lo -MD -MP -MF .deps/util.Tpo -c util.cpp -fPIC -DPIC -o .libs/util.o libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT util.lo -MD -MP -MF .deps/util.Tpo -c util.cpp -o util.o >/dev/null 2>&1 depbase=`echo enum/topenum.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/topenum.lo -MD -MP -MF $depbase.Tpo -c -o enum/topenum.lo enum/topenum.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/topenum.lo -MD -MP -MF enum/.deps/topenum.Tpo -c enum/topenum.cpp -fPIC -DPIC -o enum/.libs/topenum.o libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/topenum.lo -MD -MP -MF enum/.deps/topenum.Tpo -c enum/topenum.cpp -o enum/topenum.o >/dev/null 2>&1 depbase=`echo enum/enumerate.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate.lo -MD -MP -MF $depbase.Tpo -c -o enum/enumerate.lo enum/enumerate.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate.lo -MD -MP -MF enum/.deps/enumerate.Tpo -c enum/enumerate.cpp -fPIC -DPIC -o enum/.libs/enumerate.o libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate.lo -MD -MP -MF enum/.deps/enumerate.Tpo -c enum/enumerate.cpp -o enum/enumerate.o >/dev/null 2>&1 depbase=`echo enum/enumerate_base.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate_base.lo -MD -MP -MF $depbase.Tpo -c -o enum/enumerate_base.lo enum/enumerate_base.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate_base.lo -MD -MP -MF enum/.deps/enumerate_base.Tpo -c enum/enumerate_base.cpp -fPIC -DPIC -o enum/.libs/enumerate_base.o virtual memory exhausted: Cannot allocate memory make[7]: *** [enum/enumerate_base.lo] Error 1 make[7]: Leaving directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src/fplll' make[6]: *** [all] Error 2 make[6]: Leaving directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src/fplll' make[5]: *** [all-recursive] Error 1 make[5]: Leaving directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src' make[4]: *** [all] Error 2 make[4]: Leaving directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src' ******************************************************************************** Error building fplll-5.2.1 ******************************************************************************** real 0m48.033s user 0m40.575s sys 0m5.861s ************************************************************************ Error installing package fplll-5.2.1 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the log file /home/yuhengw/sage/logs/pkgs/fplll-5.2.1.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1' && '/home/yuhengw/sage/sage' --sh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************ Found local metadata for fplll-5.2.1 Using cached file /home/yuhengw/sage/upstream/fplll-5.2.1.tar.gz fplll-5.2.1 ==================================================== Setting up build directory for fplll-5.2.1 Finished extraction No patch files found in ../patches **************************************************** Host system: Linux server 2.6.32-042stab127.2 #1 SMP Thu Jan 4 16:41:44 MSK 2018 x86_64 x86_64 x86_64 GNU/Linux **************************************************** C compiler: gcc C compiler version: Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-28) (GCC) **************************************************** No record that 'fplll' was ever installed; skipping uninstall Configuring fplll-5.2.1 checking for a BSD-compatible install... /bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking how to print strings... printf checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... ld checking if the linker (ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /bin/nm -B checking the name lister (/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1966080 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /bin/nm -B output from gcc object... ok checking for sysroot... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... ld -m elf_x86_64 checking if the linker (ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) gcc3 checking whether make sets $(MAKE)... (cached) yes checking whether g++ supports C++11 features by default... no checking whether g++ supports C++11 features with -std=c++11... yes checking for __gmpz_init in -lgmp... yes checking for __gmp_get_memory_functions in -lgmp... yes checking for mpfr_add in -lmpfr... yes checking for mpfr_fms in -lmpfr... yes checking qd/dd_real.h usability... no checking qd/dd_real.h presence... no checking for qd/dd_real.h... no checking for ANSI C header files... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking cstdio usability... yes checking cstdio presence... yes checking for cstdio... yes checking iostream usability... yes checking iostream presence... yes checking for iostream... yes checking string usability... yes checking string presence... yes checking for string... yes checking limits usability... yes checking limits presence... yes checking for limits... yes checking vector usability... yes checking vector presence... yes checking for vector... yes checking for stdbool.h that conforms to C99... yes checking for _Bool... no checking for an ANSI C-conforming const... yes checking for inline... inline checking for size_t... yes checking for working volatile... yes checking for working strtod... yes checking for floor... yes checking for pow... yes checking for rint... yes checking for sqrt... yes checking for strtol... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating fplll/Makefile config.status: creating tests/Makefile config.status: creating fplll.pc config.status: creating config.h config.status: creating fplll/fplll_config.h config.status: executing depfiles commands config.status: executing libtool commands Building fplll-5.2.1 make[4]: Entering directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src' make all-recursive make[5]: Entering directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src' Making all in fplll make[6]: Entering directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src/fplll' make all-am make[7]: Entering directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src/fplll' depbase=`echo fplll.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT fplll.lo -MD -MP -MF $depbase.Tpo -c -o fplll.lo fplll.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT fplll.lo -MD -MP -MF .deps/fplll.Tpo -c fplll.cpp -fPIC -DPIC -o .libs/fplll.o libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT fplll.lo -MD -MP -MF .deps/fplll.Tpo -c fplll.cpp -o fplll.o >/dev/null 2>&1 depbase=`echo util.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT util.lo -MD -MP -MF $depbase.Tpo -c -o util.lo util.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT util.lo -MD -MP -MF .deps/util.Tpo -c util.cpp -fPIC -DPIC -o .libs/util.o libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT util.lo -MD -MP -MF .deps/util.Tpo -c util.cpp -o util.o >/dev/null 2>&1 depbase=`echo enum/topenum.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/topenum.lo -MD -MP -MF $depbase.Tpo -c -o enum/topenum.lo enum/topenum.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/topenum.lo -MD -MP -MF enum/.deps/topenum.Tpo -c enum/topenum.cpp -fPIC -DPIC -o enum/.libs/topenum.o libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/topenum.lo -MD -MP -MF enum/.deps/topenum.Tpo -c enum/topenum.cpp -o enum/topenum.o >/dev/null 2>&1 depbase=`echo enum/enumerate.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate.lo -MD -MP -MF $depbase.Tpo -c -o enum/enumerate.lo enum/enumerate.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate.lo -MD -MP -MF enum/.deps/enumerate.Tpo -c enum/enumerate.cpp -fPIC -DPIC -o enum/.libs/enumerate.o libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate.lo -MD -MP -MF enum/.deps/enumerate.Tpo -c enum/enumerate.cpp -o enum/enumerate.o >/dev/null 2>&1 depbase=`echo enum/enumerate_base.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate_base.lo -MD -MP -MF $depbase.Tpo -c -o enum/enumerate_base.lo enum/enumerate_base.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate_base.lo -MD -MP -MF enum/.deps/enumerate_base.Tpo -c enum/enumerate_base.cpp -fPIC -DPIC -o enum/.libs/enumerate_base.o cc1plus: out of memory allocating 32768 bytes after a total of 16076800 bytes make[7]: *** [enum/enumerate_base.lo] Error 1 make[7]: Leaving directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src/fplll' make[6]: *** [all] Error 2 make[6]: Leaving directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src/fplll' make[5]: *** [all-recursive] Error 1 make[5]: Leaving directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src' make[4]: *** [all] Error 2 make[4]: Leaving directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src' ******************************************************************************** Error building fplll-5.2.1 ******************************************************************************** real 0m45.468s user 0m38.278s sys 0m5.530s ************************************************************************ Error installing package fplll-5.2.1 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the log file /home/yuhengw/sage/logs/pkgs/fplll-5.2.1.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1' && '/home/yuhengw/sage/sage' --sh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************ Found local metadata for fplll-5.2.1 Using cached file /home/yuhengw/sage/upstream/fplll-5.2.1.tar.gz fplll-5.2.1 ==================================================== Setting up build directory for fplll-5.2.1 Finished extraction No patch files found in ../patches **************************************************** Host system: Linux server 2.6.32-042stab127.2 #1 SMP Thu Jan 4 16:41:44 MSK 2018 x86_64 x86_64 x86_64 GNU/Linux **************************************************** C compiler: gcc C compiler version: Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 4.8.5 20150623 (Red Hat 4.8.5-28) (GCC) **************************************************** No record that 'fplll' was ever installed; skipping uninstall Configuring fplll-5.2.1 checking for a BSD-compatible install... /bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking how to print strings... printf checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... ld checking if the linker (ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /bin/nm -B checking the name lister (/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1966080 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /bin/nm -B output from gcc object... ok checking for sysroot... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... ld -m elf_x86_64 checking if the linker (ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) gcc3 checking whether make sets $(MAKE)... (cached) yes checking whether g++ supports C++11 features by default... no checking whether g++ supports C++11 features with -std=c++11... yes checking for __gmpz_init in -lgmp... yes checking for __gmp_get_memory_functions in -lgmp... yes checking for mpfr_add in -lmpfr... yes checking for mpfr_fms in -lmpfr... yes checking qd/dd_real.h usability... no checking qd/dd_real.h presence... no checking for qd/dd_real.h... no checking for ANSI C header files... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking cstdio usability... yes checking cstdio presence... yes checking for cstdio... yes checking iostream usability... yes checking iostream presence... yes checking for iostream... yes checking string usability... yes checking string presence... yes checking for string... yes checking limits usability... yes checking limits presence... yes checking for limits... yes checking vector usability... yes checking vector presence... yes checking for vector... yes checking for stdbool.h that conforms to C99... yes checking for _Bool... no checking for an ANSI C-conforming const... yes checking for inline... inline checking for size_t... yes checking for working volatile... yes checking for working strtod... yes checking for floor... yes checking for pow... yes checking for rint... yes checking for sqrt... yes checking for strtol... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating fplll/Makefile config.status: creating tests/Makefile config.status: creating fplll.pc config.status: creating config.h config.status: creating fplll/fplll_config.h config.status: executing depfiles commands config.status: executing libtool commands Building fplll-5.2.1 make[4]: Entering directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src' make all-recursive make[5]: Entering directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src' Making all in fplll make[6]: Entering directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src/fplll' make all-am make[7]: Entering directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src/fplll' depbase=`echo fplll.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT fplll.lo -MD -MP -MF $depbase.Tpo -c -o fplll.lo fplll.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT fplll.lo -MD -MP -MF .deps/fplll.Tpo -c fplll.cpp -fPIC -DPIC -o .libs/fplll.o libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT fplll.lo -MD -MP -MF .deps/fplll.Tpo -c fplll.cpp -o fplll.o >/dev/null 2>&1 depbase=`echo util.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT util.lo -MD -MP -MF $depbase.Tpo -c -o util.lo util.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT util.lo -MD -MP -MF .deps/util.Tpo -c util.cpp -fPIC -DPIC -o .libs/util.o libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT util.lo -MD -MP -MF .deps/util.Tpo -c util.cpp -o util.o >/dev/null 2>&1 depbase=`echo enum/topenum.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/topenum.lo -MD -MP -MF $depbase.Tpo -c -o enum/topenum.lo enum/topenum.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/topenum.lo -MD -MP -MF enum/.deps/topenum.Tpo -c enum/topenum.cpp -fPIC -DPIC -o enum/.libs/topenum.o libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/topenum.lo -MD -MP -MF enum/.deps/topenum.Tpo -c enum/topenum.cpp -o enum/topenum.o >/dev/null 2>&1 depbase=`echo enum/enumerate.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate.lo -MD -MP -MF $depbase.Tpo -c -o enum/enumerate.lo enum/enumerate.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate.lo -MD -MP -MF enum/.deps/enumerate.Tpo -c enum/enumerate.cpp -fPIC -DPIC -o enum/.libs/enumerate.o libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate.lo -MD -MP -MF enum/.deps/enumerate.Tpo -c enum/enumerate.cpp -o enum/enumerate.o >/dev/null 2>&1 depbase=`echo enum/enumerate_base.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/bash ../libtool --tag=CXX --mode=compile g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate_base.lo -MD -MP -MF $depbase.Tpo -c -o enum/enumerate_base.lo enum/enumerate_base.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -DFPLLL_DEFAULT_STRATEGY_PATH=\"/home/yuhengw/sage/local/share/fplll/strategies\" -DFPLLL_DEFAULT_STRATEGY=\"/home/yuhengw/sage/local/share/fplll/strategies/default.json\" -I./.. -I/home/yuhengw/sage/local/include/ -I/include -fPIC -I/home/yuhengw/sage/local/include/ -L/home/yuhengw/sage/local/lib -O3 -MT enum/enumerate_base.lo -MD -MP -MF enum/.deps/enumerate_base.Tpo -c enum/enumerate_base.cpp -fPIC -DPIC -o enum/.libs/enumerate_base.o virtual memory exhausted: Cannot allocate memory make[7]: *** [enum/enumerate_base.lo] Error 1 make[7]: Leaving directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src/fplll' make[6]: *** [all] Error 2 make[6]: Leaving directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src/fplll' make[5]: *** [all-recursive] Error 1 make[5]: Leaving directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src' make[4]: *** [all] Error 2 make[4]: Leaving directory `/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1/src' ******************************************************************************** Error building fplll-5.2.1 ******************************************************************************** real 0m45.840s user 0m38.768s sys 0m5.297s ************************************************************************ Error installing package fplll-5.2.1 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the log file /home/yuhengw/sage/logs/pkgs/fplll-5.2.1.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/home/yuhengw/sage/local/var/tmp/sage/build/fplll-5.2.1' && '/home/yuhengw/sage/sage' --sh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************ Found local metadata for fplll-5.2.1 Using cached file /home/yuhengw/sage/upstream/fplll-5.2.1.tar.gz fplll-5.2.1 ==================================================== rm: cannot remove 'fplll-5.2.1/src': Permission denied ************************************************************************ Error (re)moving fplll-5.2.1 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the log file /home/yuhengw/sage/logs/pkgs/fplll-5.2.1.log Describe your computer, operating system, etc. ************************************************************************
