Hello,
I am getting an error installing Sage 7.4, due to package 2.7.5 failing to
build. I am working on a MacBook OS X El Capitan. Below the last portion
of the log file.
Thank you,
Alejandra
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(bitrotate.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(chmodat.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(chownat.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(fd-hook.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(gl_list.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(stat-time.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(statat.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(timespec.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(unistd.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(wctype-h.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(gl_xlist.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(xsize.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(bitrotate.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(chmodat.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(chownat.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(fd-hook.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(gl_list.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(stat-time.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(statat.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(timespec.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(unistd.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(wctype-h.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(gl_xlist.o) has no symbols
[patch-2.7.5]
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib:
file: libpatch.a(xsize.o) has no symbols
[patch-2.7.5] GEN charset.alias
[patch-2.7.5] GEN ref-add.sed
[patch-2.7.5] GEN ref-del.sed
[patch-2.7.5] Making all in src
[patch-2.7.5] CC inp.o
[patch-2.7.5] CC patch.o
[patch-2.7.5] patch.c:492:14: warning: adding 'int' to a string does not
append to the string [-Wstring-plus-int]
[patch-2.7.5] "s" + (in_offset == 1));
[patch-2.7.5] ~~~~^~~~~~~~~~~~~~~~~~
[patch-2.7.5] patch.c:492:14: note: use array indexing to silence this
warning
[patch-2.7.5] "s" + (in_offset == 1));
[patch-2.7.5] ^
[patch-2.7.5] & [ ]
[patch-2.7.5] patch.c:617:55: warning: adding 'int' to a string does not
append to the string [-Wstring-plus-int]
[patch-2.7.5] say ("%d out of %d hunk%s %s", failed, hunk, "s"
+ (hunk == 1),
[patch-2.7.5]
~~~~^~~~~~~~~~~~~
[patch-2.7.5] patch.c:617:55: note: use array indexing to silence this
warning
[patch-2.7.5] say ("%d out of %d hunk%s %s", failed, hunk, "s"
+ (hunk == 1),
[patch-2.7.5] ^
[patch-2.7.5] &
[ ]
[patch-2.7.5] 2 warnings generated.
[patch-2.7.5] CC pch.o
[patch-2.7.5] CC safe.o
[patch-2.7.5] CC util.o
[patch-2.7.5] util.c:562:22: warning: use of logical '&&' with constant
operand [-Wconstant-logical-operand]
[patch-2.7.5] if (! (O_CREAT && O_TRUNC))
[patch-2.7.5] ^ ~~~~~~~
[patch-2.7.5] util.c:562:22: note: use '&' for a bitwise operation
[patch-2.7.5] if (! (O_CREAT && O_TRUNC))
[patch-2.7.5] ^~
[patch-2.7.5] &
[patch-2.7.5] util.c:562:22: note: remove constant to silence this warning
[patch-2.7.5] if (! (O_CREAT && O_TRUNC))
[patch-2.7.5] ~^~~~~~~~~~
[patch-2.7.5] 1 warning generated.
[patch-2.7.5] CC version.o
[patch-2.7.5] CC merge.o
[patch-2.7.5] merge.c:471:35: warning: adding 'bool' to a string does not
append to the string [-Wstring-plus-int]
[patch-2.7.5] fputs (outstate->after_newline + "\n<<<<<<<\n", fp);
[patch-2.7.5] ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
[patch-2.7.5] merge.c:471:35: note: use array indexing to silence this
warning
[patch-2.7.5] merge.c:482:39: warning: adding 'bool' to a string does not
append to the string [-Wstring-plus-int]
[patch-2.7.5] fputs (outstate->after_newline + "\n|||||||\n",
fp);
[patch-2.7.5] ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
[patch-2.7.5] merge.c:482:39: note: use array indexing to silence this
warning
[patch-2.7.5] merge.c:491:35: warning: adding 'bool' to a string does not
append to the string [-Wstring-plus-int]
[patch-2.7.5] fputs (outstate->after_newline + "\n=======\n", fp);
[patch-2.7.5] ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
[patch-2.7.5] merge.c:491:35: note: use array indexing to silence this
warning
[patch-2.7.5] merge.c:498:35: warning: adding 'bool' to a string does not
append to the string [-Wstring-plus-int]
[patch-2.7.5] fputs (outstate->after_newline + "\n>>>>>>>\n", fp);
[patch-2.7.5] ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
[patch-2.7.5] merge.c:498:35: note: use array indexing to silence this
warning
[patch-2.7.5] 4 warnings generated.
[patch-2.7.5] CCLD patch
[patch-2.7.5] Making all in tests
[patch-2.7.5] make[5]: Nothing to be done for `all'.
[patch-2.7.5] make[5]: Nothing to be done for `all-am'.
[patch-2.7.5] make install-recursive
[patch-2.7.5] Making install in lib
[patch-2.7.5] make install-am
[patch-2.7.5] if test no = no; then \
[patch-2.7.5] case 'darwin15.6.0' in \
[patch-2.7.5] darwin[56]*) \
[patch-2.7.5] need_charset_alias=true ;; \
[patch-2.7.5] darwin* | cygwin* | mingw* | pw32* | cegcc*) \
[patch-2.7.5] need_charset_alias=false ;; \
[patch-2.7.5] *) \
[patch-2.7.5] need_charset_alias=true ;; \
[patch-2.7.5] esac ; \
[patch-2.7.5] else \
[patch-2.7.5] need_charset_alias=false ; \
[patch-2.7.5] fi ; \
[patch-2.7.5] if $need_charset_alias; then \
[patch-2.7.5] /bin/sh
/Users/alvarado/sage-7.4/local/var/tmp/sage/build/patch-2.7.5/src/build-aux/install-sh
-d /Users/alvarado/sage-7.4/local/lib ; \
[patch-2.7.5] fi ; \
[patch-2.7.5] if test -f /Users/alvarado/sage-7.4/local/lib/charset.alias;
then \
[patch-2.7.5] sed -f ref-add.sed
/Users/alvarado/sage-7.4/local/lib/charset.alias >
/Users/alvarado/sage-7.4/local/lib/charset.tmp ; \
[patch-2.7.5] /usr/bin/install -c -m 644
/Users/alvarado/sage-7.4/local/lib/charset.tmp
/Users/alvarado/sage-7.4/local/lib/charset.alias ; \
[patch-2.7.5] rm -f /Users/alvarado/sage-7.4/local/lib/charset.tmp ; \
[patch-2.7.5] else \
[patch-2.7.5] if $need_charset_alias; then \
[patch-2.7.5] sed -f ref-add.sed charset.alias >
/Users/alvarado/sage-7.4/local/lib/charset.tmp ; \
[patch-2.7.5] /usr/bin/install -c -m 644
/Users/alvarado/sage-7.4/local/lib/charset.tmp
/Users/alvarado/sage-7.4/local/lib/charset.alias ; \
[patch-2.7.5] rm -f /Users/alvarado/sage-7.4/local/lib/charset.tmp ; \
[patch-2.7.5] fi ; \
[patch-2.7.5] fi
[patch-2.7.5] make[7]: Nothing to be done for `install-data-am'.
[patch-2.7.5] Making install in src
[patch-2.7.5] ../build-aux/install-sh -c -d
'/Users/alvarado/sage-7.4/local/bin'
[patch-2.7.5] /usr/bin/install -c patch
'/Users/alvarado/sage-7.4/local/bin'
[patch-2.7.5] make[6]: Nothing to be done for `install-data-am'.
[patch-2.7.5] Making install in tests
[patch-2.7.5] make[6]: Nothing to be done for `install-exec-am'.
[patch-2.7.5] make[6]: Nothing to be done for `install-data-am'.
[patch-2.7.5] make[6]: Nothing to be done for `install-exec-am'.
[patch-2.7.5] build-aux/install-sh -c -d
'/Users/alvarado/sage-7.4/local/share/man/man1'
[patch-2.7.5] /usr/bin/install -c -m 644 'patch.man'
'/Users/alvarado/sage-7.4/local/share/man/man1/patch.1'
[patch-2.7.5] dyld: lazy symbol binding failed: Symbol not found:
_clock_gettime
[patch-2.7.5] Referenced from: /Users/alvarado/sage-7.4/local/bin/patch
[patch-2.7.5] Expected in: /usr/lib/libSystem.B.dylib
[patch-2.7.5]
[patch-2.7.5] dyld: Symbol not found: _clock_gettime
[patch-2.7.5] Referenced from: /Users/alvarado/sage-7.4/local/bin/patch
[patch-2.7.5] Expected in: /usr/lib/libSystem.B.dylib
[patch-2.7.5]
[patch-2.7.5] Cannot find the patch program we just installed
[patch-2.7.5]
[patch-2.7.5] real 3m7.187s
[patch-2.7.5] user 0m47.279s
[patch-2.7.5] sys 0m40.888s
[patch-2.7.5]
************************************************************************
[patch-2.7.5] Error installing package patch-2.7.5
[patch-2.7.5]
************************************************************************
[patch-2.7.5] Please email sage-devel
(http://groups.google.com/group/sage-devel)
[patch-2.7.5] explaining the problem and including the relevant part of the
log file
[patch-2.7.5] /Users/alvarado/sage-7.4/logs/pkgs/patch-2.7.5.log
[patch-2.7.5] Describe your computer, operating system, etc.
[patch-2.7.5] If you want to try to fix the problem yourself, *don't* just
cd to
[patch-2.7.5] /Users/alvarado/sage-7.4/local/var/tmp/sage/build/patch-2.7.5
and type 'make' or whatever is appropriate.
[patch-2.7.5] Instead, the following commands setup all environment
variables
[patch-2.7.5] correctly and load a subshell for you to debug the error:
[patch-2.7.5] (cd
'/Users/alvarado/sage-7.4/local/var/tmp/sage/build/patch-2.7.5' &&
'/Users/alvarado/sage-7.4/sage' --sh)
[patch-2.7.5] When you are done debugging, you can type "exit" to leave the
subshell.
[patch-2.7.5]
************************************************************************
make[2]: ***
[/Users/alvarado/sage-7.4/local/var/lib/sage/installed/patch-2.7.5] Error 1
make[1]: *** [all-toolchain] Error 2
real 3m16.267s
user 0m47.973s
sys 0m41.654s
***************************************************************
Error building Sage.
The following package(s) may have failed to build (not necessarily
during this run of 'make all'):
* package: patch-2.7.5
log file: /Users/alvarado/sage-7.4/logs/pkgs/patch-2.7.5.log
build directory:
/Users/alvarado/sage-7.4/local/var/tmp/sage/build/patch-2.7.5
The build directory may contain configuration files and other potentially
helpful information. WARNING: if you now run 'make' again, the build
directory will, by default, be deleted. Set the environment variable
SAGE_KEEP_BUILT_SPKGS to 'yes' to prevent this.
make: *** [all] Error 1
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