$ cat file.rst 

Cite many times the same item [ABCDEF]_ [ABCDEF]_ is okay.

.. [ABCDEF] bibliography

Many times the same item [XYZ]_ in bibliography in the same file is not 
okay.

.. [XYZ] bibliography1
.. [XYZ] bibliography2

labbe@priminfo tmp $ rst2html file.rst file.html
file.rst:9: (WARNING/2) Duplicate explicit target name: "xyz".
file.rst:6: (ERROR/3) Duplicate target name, cannot be used as a unique 
reference: "xyz".

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