[ Erroneously reported first on sage-release. Apologies.. ]
I can't build sage 7.4beta6 on Debian testing : PARI fails to build on a
(copy of) a (functional) Sage tree after distclean. See the attached log.
This happens either after (repeated) attempts at parallel build or with a
serial build.
HTH,
--
Emmanuel Charpentier
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Found local metadata for pari-2.8.0.alpha.p0
Using cached file /usr/local/sage-exp/upstream/pari-2.8.0.alpha.tar.gz
pari-2.8.0.alpha.p0
====================================================
Setting up build directory for pari-2.8.0.alpha.p0
Finished extraction
****************************************************
Host system:
Linux asus16-ec 4.6.0-1-amd64 #1 SMP Debian 4.6.4-1 (2016-07-18) x86_64
GNU/Linux
****************************************************
C compiler: gcc
C compiler version:
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/6/lto-wrapper
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Debian 6.1.1-11'
--with-bugurl=file:///usr/share/doc/gcc-6/README.Bugs
--enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr
--program-suffix=-6 --enable-shared --enable-linker-build-id
--libexecdir=/usr/lib --without-included-gettext --enable-threads=posix
--libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu
--enable-libstdcxx-debug --enable-libstdcxx-time=yes
--with-default-libstdcxx-abi=new --enable-gnu-unique-object
--disable-vtable-verify --enable-libmpx --enable-plugin --with-system-zlib
--disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo
--with-java-home=/usr/lib/jvm/java-1.5.0-gcj-6-amd64/jre --enable-java-home
--with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-6-amd64
--with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-6-amd64
--with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar
--enable-objc-gc --enable-multiarch --with-arch-32=i686 --with-abi=m64
--with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic
--enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu
--target=x86_64-linux-gnu
Thread model: posix
gcc version 6.1.1 20160802 (Debian 6.1.1-11)
****************************************************
patching file config/get_config_options
Hunk #1 succeeded at 60 (offset 2 lines).
Hunk #2 succeeded at 140 (offset -10 lines).
patching file config/get_dlcflags
patching file src/language/init.c
Hunk #1 succeeded at 742 (offset 20 lines).
Hunk #2 succeeded at 757 (offset 20 lines).
Hunk #3 succeeded at 772 (offset 20 lines).
patching file src/test/dotest
============================================================
Configuring PARI/GP without graphics support (for plotting).
If you need it, pass the appropriate option(s) to PARI by
setting and exporting $PARI_CONFIGURE prior to building
Sage (or at least before you build/install the PARI spkg),
e.g. by typing at the shell prompt:
export PARI_CONFIGURE="--graphic=auto"
or
export PARI_CONFIGURE="--with-fltk"
Note that PARI doesn't treat it as an error if the requested
graphics library or the corresponding header files are not
found; it will then simply disable graphics support.
Please consult the PARI documentation for further details.
============================================================
To minimize Sage build time and to ensure the best reliability, PARI/GP
will not be tuned for your system. Experience shows tuning can be
unreliable. If you do want to tune PARI/GP, set the environment
variable SAGE_TUNE_pari="yes" by typing the following before building
Sage (or at least before building/installing PARI/GP):
SAGE_TUNE_pari=yes
export SAGE_TUNE_pari
If you do this, we strongly recommend to also enable checking. For this,
type the following:
SAGE_CHECK=yes
export SAGE_CHECK
Configuring pari-2.8.0 (DEVELOPMENT VERSION)
Checking echo to see how to suppress newlines...
...using -n.
Looking for some tools first ...
...gzip is /bin/gzip
...cc is /usr/bin/cc
...gcc is /usr/bin/gcc
...ld is /usr/bin/ld
...perl is /usr/bin/perl
...zcat is /bin/zcat
GNU compatible compiler: gcc version 6.1.1 20160802 (Debian 6.1.1-11)
Using mt engine single
Given the previous choices, sizeof(long) is 8 chars.
The internal word representation of a double is not needed (64bit).
==========================================================================
Building for: amd64 running linux (x86-64/GMP kernel) 64-bit version
==========================================================================
C compiler is gcc -O3 -Wall -fno-strict-aliasing -fomit-frame-pointer
-g -fPIC
Executable linker is gcc -O3 -Wall -fno-strict-aliasing -fomit-frame-pointer
-g -Wl,--export-dynamic -L/usr/local/sage-exp/local/lib
-Wl,-rpath,/usr/local/sage-exp/local/lib
Dynamic Lib linker is gcc -shared $(CFLAGS) $(DLCFLAGS)
-Wl,-shared,-soname=$(LIBPARI_SONAME) -L/usr/local/sage-exp/local/lib
-Wl,-rpath,/usr/local/sage-exp/local/lib
Looking in C lib for some symbols...
...Found exp2.
...Found log2.
...Found strftime.
...Found getrusage.
...Found gettimeofday.
...Found sigaction.
...Found TIOCGWINSZ.
...Found getrlimit.
...Found stat.
...Found vsnprintf.
...Found mmap.
...Found waitpid.
...Found setsid.
...Found getenv.
...Found isatty.
...Found alarm.
...Found system.
...I did not find dlopen.
Try again, with -ldl this time...
...Found dlopen.
Checking for optional libraries and headers...
...Found gmp header in /usr/local/sage-exp/local/include
Using GNU MP, version 5.1.3
Hi-Res Graphics: none
...Found readline header in /usr/local/sage-exp/local/include/readline
Using GNU readline, version 6.3
Installation prefix ? [/usr/local/sage-exp/local]
...for architecture-independent files (share-prefix) ?
[/usr/local/sage-exp/local/share]
Installation directories for:
...executables (gp, gphelp) ? [/usr/local/sage-exp/local/bin]
...libraries (libpari) ? [/usr/local/sage-exp/local/lib]
...include files ? [/usr/local/sage-exp/local/include]
...manual pages ? [/usr/local/sage-exp/local/share/man/man1]
...other system-dependent data ? [/usr/local/sage-exp/local/lib/pari]
...other system-independent data ? [/usr/local/sage-exp/local/share/pari]
Default is dynamic executable and shared library
==========================================================================
Extracting examples/Makefile.linux-x86_64
Extracting Olinux-x86_64/Makefile
Extracting Makefile
Extracting Olinux-x86_64/paricfg.h
Extracting scripts and macros
...in doc
...in misc
==========================================================================
Shall we try to build pari 2.8.0 (alpha) now (y/n)? [n]
Ok. Type "make install" when you are ready
Bye !
make[3]: Entering directory
'/usr/local/sage-exp/local/var/tmp/sage/build/pari-2.8.0.alpha.p0/src'
Making gp in Olinux-x86_64
make[4]: Entering directory
'/usr/local/sage-exp/local/var/tmp/sage/build/pari-2.8.0.alpha.p0/src/Olinux-x86_64'
../config/genkernel ../src ../src/kernel/x86_64/asm0.h > parilvl0.h
if test -r ./tune.h; then d=.; else d=../src/kernel/gmp; fi; cat
$d/tune.h ../src/kernel/gmp/int.h ../src/kernel/none/level1.h > parilvl1.h
cat parilvl0.h parilvl1.h > mpinl.h
cat ../src/mt/single.h > parimt.h
gcc -c -I. -I../src/headers -fPIC -O3 -Wall -fno-strict-aliasing
-fomit-frame-pointer -g -o emacs.o ../src/gp/emacs.c
f=funclist-$$-linux-x86_64.tmp; (cd ../src/desc && /usr/bin/perl merge_822
../../src/funclist > $f) && mv ../src/desc/$f ../src/desc/pari.desc
Can't locate PARI/822.pm in @INC (you may need to install the PARI::822 module)
(@INC contains: /usr/local/sage-exp/local/lib/perl5 /etc/perl
/usr/local/lib/x86_64-linux-gnu/perl/5.22.2 /usr/local/share/perl/5.22.2
/usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5
/usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22
/usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base) at merge_822 line
2.
BEGIN failed--compilation aborted at merge_822 line 2.
Makefile:956: recipe for target '../src/desc/pari.desc' failed
make[4]: *** [../src/desc/pari.desc] Error 2
make[4]: Leaving directory
'/usr/local/sage-exp/local/var/tmp/sage/build/pari-2.8.0.alpha.p0/src/Olinux-x86_64'
Makefile:34: recipe for target 'gp' failed
make[3]: *** [gp] Error 2
make[3]: Leaving directory
'/usr/local/sage-exp/local/var/tmp/sage/build/pari-2.8.0.alpha.p0/src'
Error: Building PARI/GP failed.
real 0m1.799s
user 0m0.640s
sys 0m0.108s
************************************************************************
Error installing package pari-2.8.0.alpha.p0
************************************************************************
Please email sage-devel (http://groups.google.com/group/sage-devel)
explaining the problem and including the relevant part of the log file
/usr/local/sage-exp/logs/pkgs/pari-2.8.0.alpha.p0.log
Describe your computer, operating system, etc.
If you want to try to fix the problem yourself, *don't* just cd to
/usr/local/sage-exp/local/var/tmp/sage/build/pari-2.8.0.alpha.p0 and type
'make' or whatever is appropriate.
Instead, the following commands setup all environment variables
correctly and load a subshell for you to debug the error:
(cd '/usr/local/sage-exp/local/var/tmp/sage/build/pari-2.8.0.alpha.p0' &&
'/usr/local/sage-exp/sage' --sh)
When you are done debugging, you can type "exit" to leave the subshell.
************************************************************************
