Those are files generated by cython - they should be in .gitignore. François
> On 16/03/2015, at 18:24, Travis Scrimshaw <tsc...@ucdavis.edu> wrote: > > Hey everyone, > After upgrading to 6.6.beta5, I get the following list of untracked files > from git status: > > # Untracked files: > # (use "git add <file>..." to include in what will be committed) > # > # src/sage/algebras/letterplace/free_algebra_element_letterplace.cpp > # src/sage/algebras/letterplace/free_algebra_letterplace.cpp > # src/sage/algebras/letterplace/letterplace_ideal.cpp > # src/sage/algebras/quatalg/quaternion_algebra_cython.cpp > # src/sage/algebras/quatalg/quaternion_algebra_element.cpp > # src/sage/calculus/interpolators.c > # src/sage/calculus/riemann.c > # src/sage/calculus/var.c > # src/sage/categories/action.c > # src/sage/categories/category_singleton.c > # src/sage/categories/examples/semigroups_cython.c > # src/sage/categories/functor.c > # src/sage/categories/map.c > # src/sage/categories/morphism.c > # src/sage/coding/binary_code.c > # src/sage/coding/codecan/autgroup_can_label.c > # src/sage/coding/codecan/codecan.c > # src/sage/combinat/combinat_cython.c > # src/sage/combinat/crystals/letters.c > # src/sage/combinat/debruijn_sequence.c > # src/sage/combinat/degree_sequences.c > # src/sage/combinat/dict_addition.c > # src/sage/combinat/enumeration_mod_permgroup.c > # src/sage/combinat/expnums.c > # src/sage/combinat/matrices/dancing_links.cpp > # src/sage/combinat/partitions.cpp > # src/sage/combinat/permutation_cython.c > # src/sage/combinat/q_bernoulli.c > # src/sage/combinat/words/word_datatypes.cpp > # src/sage/crypto/boolean_function.c > # src/sage/ext/c_lib.c > # src/sage/ext/fast_callable.c > # src/sage/ext/fast_eval.c > # src/sage/ext/interactive_constructors_c.c > # src/sage/ext/multi_modular.c > # src/sage/ext/pselect.c > # src/sage/finance/fractal.c > # src/sage/finance/markov_multifractal_cython.c > # src/sage/finance/option.c > # src/sage/finance/time_series.c > # src/sage/functions/prime_pi.c > # src/sage/games/sudoku_backtrack.c > # src/sage/geometry/integral_points.c > # src/sage/geometry/point_collection.c > # src/sage/geometry/toric_lattice_element.c > # src/sage/geometry/triangulation/base.cpp > # src/sage/graphs/base/c_graph.c > # src/sage/graphs/base/dense_graph.c > # src/sage/graphs/base/sparse_graph.c > # src/sage/graphs/base/static_dense_graph.c > # src/sage/graphs/base/static_sparse_backend.c > # src/sage/graphs/base/static_sparse_graph.c > # src/sage/graphs/chrompoly.c > # src/sage/graphs/cliquer.c > # src/sage/graphs/comparability.c > # src/sage/graphs/convexity_properties.c > # src/sage/graphs/distances_all_pairs.c > # src/sage/graphs/generic_graph_pyx.c > # src/sage/graphs/genus.c > # src/sage/graphs/graph_decompositions/graph_products.c > # src/sage/graphs/graph_decompositions/rankwidth.c > # src/sage/graphs/graph_decompositions/vertex_separation.c > # src/sage/graphs/graph_generators_pyx.c > # src/sage/graphs/hyperbolicity.c > # src/sage/graphs/independent_sets.c > # src/sage/graphs/matchpoly.c > # src/sage/graphs/modular_decomposition/modular_decomposition.c > # src/sage/graphs/planarity.c > # src/sage/graphs/spanning_tree.c > # src/sage/graphs/trees.c > # src/sage/graphs/weakly_chordal.c > # src/sage/groups/group.c > # src/sage/groups/libgap_wrapper.c > # src/sage/groups/old.c > # src/sage/groups/perm_gps/partn_ref/automorphism_group_canonical_label.c > # src/sage/groups/perm_gps/partn_ref/canonical_augmentation.c > # src/sage/groups/perm_gps/partn_ref/double_coset.c > # src/sage/groups/perm_gps/partn_ref/refinement_binary.c > # src/sage/groups/perm_gps/partn_ref/refinement_graphs.c > # src/sage/groups/perm_gps/partn_ref/refinement_lists.c > # src/sage/groups/perm_gps/partn_ref/refinement_matrices.c > # src/sage/groups/perm_gps/partn_ref/refinement_python.c > # src/sage/groups/perm_gps/partn_ref/refinement_sets.c > # src/sage/groups/perm_gps/partn_ref2/refinement_generic.c > # src/sage/groups/perm_gps/permgroup_element.c > # > src/sage/groups/semimonomial_transformations/semimonomial_transformation.c > # src/sage/gsl/callback.c > # src/sage/gsl/dwt.c > # src/sage/gsl/fft.c > # src/sage/gsl/gsl_array.c > # src/sage/gsl/integration.c > # src/sage/gsl/interpolation.c > # src/sage/gsl/ode.c > # src/sage/gsl/probability_distribution.c > # src/sage/interacts/library_cython.c > # src/sage/libs/coxeter3/coxeter.cpp > # src/sage/libs/cremona/homspace.cpp > # src/sage/libs/cremona/mat.cpp > # src/sage/libs/cremona/newforms.cpp > # src/sage/libs/ecl.c > # src/sage/libs/flint/arith.c > # src/sage/libs/flint/flint.c > # src/sage/libs/flint/fmpz_poly.c > # src/sage/libs/fplll/fplll.cpp > # src/sage/libs/gap/element.c > # src/sage/libs/gap/libgap.c > # src/sage/libs/gap/util.c > # src/sage/libs/lcalc/lcalc_Lfunction.cpp > # src/sage/libs/libecm.c > # src/sage/libs/linbox/linbox.cpp > # src/sage/libs/lrcalc/lrcalc.c > # src/sage/libs/mpmath/ext_impl.c > # src/sage/libs/mpmath/ext_libmp.c > # src/sage/libs/mpmath/ext_main.c > # src/sage/libs/mpmath/utils.c > # src/sage/libs/mwrank/mwrank.c > # src/sage/libs/ntl/ntl_GF2.cpp > # src/sage/libs/ntl/ntl_GF2E.cpp > # src/sage/libs/ntl/ntl_GF2EContext.cpp > # src/sage/libs/ntl/ntl_GF2EX.cpp > # src/sage/libs/ntl/ntl_GF2X.cpp > # src/sage/libs/ntl/ntl_ZZ.cpp > # src/sage/libs/ntl/ntl_ZZX.cpp > # src/sage/libs/ntl/ntl_ZZ_p.cpp > # src/sage/libs/ntl/ntl_ZZ_pContext.cpp > # src/sage/libs/ntl/ntl_ZZ_pE.cpp > # src/sage/libs/ntl/ntl_ZZ_pEContext.cpp > # src/sage/libs/ntl/ntl_ZZ_pEX.cpp > # src/sage/libs/ntl/ntl_ZZ_pX.cpp > # src/sage/libs/ntl/ntl_lzz_p.cpp > # src/sage/libs/ntl/ntl_lzz_pContext.cpp > # src/sage/libs/ntl/ntl_lzz_pX.cpp > # src/sage/libs/ntl/ntl_mat_GF2.cpp > # src/sage/libs/ntl/ntl_mat_GF2E.cpp > # src/sage/libs/ntl/ntl_mat_ZZ.cpp > # src/sage/libs/pari/gen.c > # src/sage/libs/pari/handle_error.c > # src/sage/libs/pari/pari_instance.c > # src/sage/libs/ppl.cpp > # src/sage/libs/ratpoints.c > # src/sage/libs/readline.c > # src/sage/libs/singular/function.cpp > # src/sage/libs/singular/groebner_strategy.cpp > # src/sage/libs/singular/option.cpp > # src/sage/libs/singular/polynomial.cpp > # src/sage/libs/singular/ring.cpp > # src/sage/libs/singular/singular.cpp > # src/sage/libs/symmetrica/symmetrica.c > # src/sage/matrix/action.c > # src/sage/matrix/change_ring.c > # src/sage/matrix/matrix.c > # src/sage/matrix/matrix0.c > # src/sage/matrix/matrix1.c > # src/sage/matrix/matrix2.c > # src/sage/matrix/matrix_complex_double_dense.c > # src/sage/matrix/matrix_cyclo_dense.cpp > # src/sage/matrix/matrix_dense.c > # src/sage/matrix/matrix_double_dense.c > # src/sage/matrix/matrix_generic_dense.c > # src/sage/matrix/matrix_generic_sparse.c > # src/sage/matrix/matrix_integer_2x2.c > # src/sage/matrix/matrix_integer_dense.c > # src/sage/matrix/matrix_integer_sparse.c > # src/sage/matrix/matrix_mod2_dense.c > # src/sage/matrix/matrix_mod2e_dense.c > # src/sage/matrix/matrix_modn_dense.c > # src/sage/matrix/matrix_modn_dense_double.cpp > # src/sage/matrix/matrix_modn_dense_float.cpp > # src/sage/matrix/matrix_modn_sparse.c > # src/sage/matrix/matrix_mpolynomial_dense.cpp > # src/sage/matrix/matrix_rational_dense.c > # src/sage/matrix/matrix_rational_sparse.c > # src/sage/matrix/matrix_real_double_dense.c > # src/sage/matrix/matrix_sparse.c > # src/sage/matrix/matrix_symbolic_dense.c > # src/sage/matrix/matrix_window.c > # src/sage/matrix/matrix_window_modn_dense.c > # src/sage/matrix/misc.c > # src/sage/matrix/strassen.c > # src/sage/matroids/basis_exchange_matroid.c > # src/sage/matroids/basis_matroid.c > # src/sage/matroids/circuit_closures_matroid.c > # src/sage/matroids/extension.c > # src/sage/matroids/lean_matrix.c > # src/sage/matroids/linear_matroid.c > # src/sage/matroids/matroid.c > # src/sage/matroids/set_system.c > # src/sage/matroids/unpickling.c > # src/sage/media/channels.c > # src/sage/misc/allocator.c > # src/sage/misc/binary_tree.c > # src/sage/misc/bitset.c > # src/sage/misc/c3.c > # src/sage/misc/c3_controlled.c > # src/sage/misc/cachefunc.c > # src/sage/misc/citation.c > # src/sage/misc/classcall_metaclass.c > # src/sage/misc/constant_function.c > # src/sage/misc/cython_c.c > # src/sage/misc/derivative.c > # src/sage/misc/fast_methods.c > # src/sage/misc/fpickle.c > # src/sage/misc/function_mangling.c > # src/sage/misc/lazy_attribute.c > # src/sage/misc/lazy_import.c > # src/sage/misc/lazy_list.c > # src/sage/misc/misc_c.c > # src/sage/misc/nested_class.c > # src/sage/misc/parser.c > # src/sage/misc/pickle_old.c > # src/sage/misc/randstate.c > # src/sage/misc/refcount.c > # src/sage/misc/reset.c > # src/sage/misc/sage_timeit_class.c > # src/sage/misc/search.c > # src/sage/misc/session.c > # src/sage/misc/stopgap.c > # src/sage/misc/weak_dict.c > # src/sage/modular/arithgroup/arithgroup_element.c > # src/sage/modular/arithgroup/congroup_pyx.c > # src/sage/modular/arithgroup/farey_symbol.cpp > # src/sage/modular/arithgroup/farey_symbol.h > # src/sage/modular/modform/eis_series_cython.c > # src/sage/modular/modsym/apply.c > # src/sage/modular/modsym/heilbronn.c > # src/sage/modular/modsym/p1list.c > # src/sage/modular/modsym/relation_matrix_pyx.c > # src/sage/modules/finite_submodule_iter.c > # src/sage/modules/free_module_element.c > # src/sage/modules/module.c > # src/sage/modules/vector_complex_double_dense.c > # src/sage/modules/vector_double_dense.c > # src/sage/modules/vector_integer_dense.c > # src/sage/modules/vector_mod2_dense.c > # src/sage/modules/vector_modn_dense.c > # src/sage/modules/vector_rational_dense.c > # src/sage/modules/vector_real_double_dense.c > # src/sage/numerical/backends/generic_backend.c > # src/sage/numerical/backends/glpk_backend.cpp > # src/sage/numerical/backends/glpk_graph_backend.cpp > # src/sage/numerical/backends/ppl_backend.c > # src/sage/numerical/linear_functions.c > # src/sage/numerical/mip.c > # src/sage/plot/complex_plot.c > # src/sage/plot/plot3d/base.c > # src/sage/plot/plot3d/implicit_surface.c > # src/sage/plot/plot3d/index_face_set.c > # src/sage/plot/plot3d/parametric_surface.c > # src/sage/plot/plot3d/shapes.c > # src/sage/plot/plot3d/transform.c > # src/sage/quadratic_forms/count_local_2.c > # src/sage/quadratic_forms/quadratic_form__evaluate.c > # src/sage/quadratic_forms/ternary.c > # src/sage/repl/inputhook.c > # src/sage/repl/readline_extra_commands.c > # src/sage/rings/bernmm.cpp > # src/sage/rings/bernoulli_mod_p.cpp > # src/sage/rings/complex_double.c > # src/sage/rings/complex_interval.c > # src/sage/rings/complex_mpc.c > # src/sage/rings/complex_number.c > # src/sage/rings/factorint.c > # src/sage/rings/fast_arith.c > # src/sage/rings/finite_rings/element_base.c > # src/sage/rings/finite_rings/element_givaro.cpp > # src/sage/rings/finite_rings/element_ntl_gf2e.cpp > # src/sage/rings/finite_rings/element_pari_ffelt.c > # src/sage/rings/finite_rings/finite_field_base.c > # src/sage/rings/finite_rings/hom_finite_field.c > # src/sage/rings/finite_rings/hom_finite_field_givaro.cpp > # src/sage/rings/finite_rings/hom_prime_finite_field.c > # src/sage/rings/finite_rings/integer_mod.c > # src/sage/rings/fraction_field_FpT.cpp > # src/sage/rings/fraction_field_element.c > # src/sage/rings/function_field/function_field_element.c > # src/sage/rings/integer.c > # src/sage/rings/integer_ring.c > # src/sage/rings/laurent_series_ring_element.c > # src/sage/rings/morphism.c > # src/sage/rings/noncommutative_ideals.c > # src/sage/rings/number_field/number_field_base.c > # src/sage/rings/number_field/number_field_element.cpp > # src/sage/rings/number_field/number_field_element_quadratic.cpp > # src/sage/rings/number_field/number_field_morphisms.c > # src/sage/rings/number_field/totallyreal.c > # src/sage/rings/number_field/totallyreal_data.c > # src/sage/rings/padics/common_conversion.c > # src/sage/rings/padics/local_generic_element.c > # src/sage/rings/padics/morphism.c > # src/sage/rings/padics/padic_ZZ_pX_CA_element.cpp > # src/sage/rings/padics/padic_ZZ_pX_CR_element.cpp > # src/sage/rings/padics/padic_ZZ_pX_FM_element.cpp > # src/sage/rings/padics/padic_ZZ_pX_element.cpp > # src/sage/rings/padics/padic_capped_absolute_element.c > # src/sage/rings/padics/padic_capped_relative_element.c > # src/sage/rings/padics/padic_ext_element.cpp > # src/sage/rings/padics/padic_fixed_mod_element.c > # src/sage/rings/padics/padic_generic_element.c > # src/sage/rings/padics/padic_printing.cpp > # src/sage/rings/padics/pow_computer.cpp > # src/sage/rings/padics/pow_computer_ext.cpp > # src/sage/rings/polynomial/cyclotomic.c > # src/sage/rings/polynomial/laurent_polynomial.c > # src/sage/rings/polynomial/multi_polynomial.c > # src/sage/rings/polynomial/multi_polynomial_ideal_libsingular.cpp > # src/sage/rings/polynomial/multi_polynomial_libsingular.cpp > # src/sage/rings/polynomial/multi_polynomial_ring_generic.c > # src/sage/rings/polynomial/pbori.cpp > # src/sage/rings/polynomial/plural.cpp > # src/sage/rings/polynomial/polydict.c > # src/sage/rings/polynomial/polynomial_compiled.c > # src/sage/rings/polynomial/polynomial_element.c > # src/sage/rings/polynomial/polynomial_gf2x.cpp > # src/sage/rings/polynomial/polynomial_integer_dense_flint.cpp > # src/sage/rings/polynomial/polynomial_integer_dense_ntl.cpp > # src/sage/rings/polynomial/polynomial_modn_dense_ntl.cpp > # src/sage/rings/polynomial/polynomial_rational_flint.cpp > # src/sage/rings/polynomial/polynomial_real_mpfr_dense.c > # src/sage/rings/polynomial/polynomial_ring_homomorphism.c > # src/sage/rings/polynomial/polynomial_zmod_flint.cpp > # src/sage/rings/polynomial/polynomial_zz_pex.cpp > # src/sage/rings/polynomial/real_roots.c > # src/sage/rings/polynomial/symmetric_reduction.c > # src/sage/rings/power_series_mpoly.c > # src/sage/rings/power_series_poly.c > # src/sage/rings/power_series_ring_element.c > # src/sage/rings/rational.c > # src/sage/rings/real_double.c > # src/sage/rings/real_interval_absolute.c > # src/sage/rings/real_lazy.c > # src/sage/rings/real_mpfi.c > # src/sage/rings/real_mpfi.h > # src/sage/rings/real_mpfr.c > # src/sage/rings/residue_field.c > # src/sage/rings/ring.c > # src/sage/rings/semirings/tropical_semiring.c > # src/sage/rings/universal_cyclotomic_field/universal_cyclotomic_field_c.c > # src/sage/sat/solvers/satsolver.c > # src/sage/schemes/elliptic_curves/descent_two_isogeny.c > # src/sage/schemes/elliptic_curves/period_lattice_region.c > # src/sage/schemes/hyperelliptic_curves/hypellfrob.cpp > # src/sage/schemes/projective/projective_morphism_helper.c > # src/sage/schemes/toric/divisor_class.c > # src/sage/sets/disjoint_set.c > # src/sage/sets/finite_set_map_cy.c > # src/sage/sets/recursively_enumerated_set.c > # src/sage/stats/hmm/chmm.c > # src/sage/stats/hmm/distributions.c > # src/sage/stats/hmm/hmm.c > # src/sage/stats/hmm/util.c > # src/sage/stats/intlist.c > # src/sage/structure/category_object.c > # src/sage/structure/coerce.c > # src/sage/structure/coerce_actions.c > # src/sage/structure/coerce_dict.c > # src/sage/structure/coerce_maps.c > # src/sage/structure/debug_options.c > # src/sage/structure/element.c > # src/sage/structure/element_wrapper.c > # src/sage/structure/factory.c > # src/sage/structure/generators.c > # src/sage/structure/list_clone.c > # src/sage/structure/list_clone_demo.c > # src/sage/structure/list_clone_timings_cy.c > # src/sage/structure/misc.c > # src/sage/structure/mutability.c > # src/sage/structure/parent.c > # src/sage/structure/parent_base.c > # src/sage/structure/parent_gens.c > # src/sage/structure/parent_old.c > # src/sage/structure/sage_object.c > # src/sage/structure/wrapper_parent.c > # src/sage/symbolic/constants_c.cpp > # src/sage/symbolic/expression.cpp > # src/sage/symbolic/function.cpp > # src/sage/symbolic/getitem.cpp > # src/sage/symbolic/pynac.cpp > # src/sage/symbolic/pynac.h > # src/sage/symbolic/ring.cpp > # src/sage/symbolic/substitution_map.cpp > # src/sage/tests/cython.c > # src/sage/tests/interrupt.c > # src/sage/tests/stl_vector.cpp > > IIRC, the git ignore list is a tracked file, so I don't want to make such a > change locally. I could update my local repo exclude list, but I'm curious > what changed and/or if these files should be in the .gitignore file. > > Best, > Travis > > > -- > You received this message because you are subscribed to the Google Groups > "sage-devel" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to sage-devel+unsubscr...@googlegroups.com. > To post to this group, send email to sage-devel@googlegroups.com. > Visit this group at http://groups.google.com/group/sage-devel. > For more options, visit https://groups.google.com/d/optout. -- You received this message because you are subscribed to the Google Groups "sage-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-devel+unsubscr...@googlegroups.com. To post to this group, send email to sage-devel@googlegroups.com. Visit this group at http://groups.google.com/group/sage-devel. For more options, visit https://groups.google.com/d/optout.
