On 2014-03-12, Evan Oman <evan...@gmail.com> wrote:
> Hmm, it is just sitting there on that line again, is it expecting input? It 
> seems to be passing all of the tests.

you might instead just install the relevant Cygwin libs, and use them,
instead of building Altas.
See SAGE_ATLAS_LIB in
http://www.sagemath.org/doc/installation/source.html#environment-variables

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