I confirm this behavior on a fresh install of version 5.9 from the sources: 
sage -clone triggers the recompilation of the Cython sources. In version 
5.8, it did not. Don't know the reason for this...

Eric.

Le vendredi 10 mai 2013 14:53:27 UTC+2, vdelecroix a écrit :
>
> Hi,
>
> It seems that the behavior of "sage -clone" changes around the version 
> 5.9. I freshly compiled a version of 5.10.beta2 and when I do a clone it 
> recompiles the wholse sage sources (but hopefully not the auxilliary spkg). 
> The first line in the log of "sage -clone" which differs from previous 
> version is the following
>
> Updating Cython code....
> Compiling sage/algebras/quatalg/quaternion_algebra_element.pyx because it 
> depends on ./sage/structure/sage_object.pxd
> ...
>
> I was not able to find some information elsewhere.
>
> Best,
> Vincent
>

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