On Mon, Aug 23, 2010 at 8:25 PM, Jonathan Hanke <jonha...@gmail.com> wrote:
> Hi,
>
> I'm trying to build sage 4.5.2 on a Sun Fire X4450 server (Intel Xenon
> processors) running Redhat linux (Enterprise edition), and get an error when
> building Atlas in the make script.  Any comments are appreciated.  Thanks,

I just tried building 4.5.3.alpha2 on *your* computer (rosemary) in
/home/wstein/build/sage-4.5.3.alpha2 and it worked fine.  Note that I
set this environment variable:

  export SAGE_FAT_BINARY=yes

This changes how ATLAS is built to use a sort of "lowest common
denominator" configuration.
You might try that.   It can potentially make numerical linear algebra
slower for you, but I doubt
you do a lot of that.

>
> -Jon
>  =)
>
>
> ------------------------------------------------------------------------------------------------------------------------------
>
> ATLAS install complete.  Examine
> ATLAS/bin/<arch>/INSTALL_LOG/SUMMARY.LOG for details.
> make[3]: Leaving directory
> `/home/jonhanke/sage-4.5.2/spkg/build/atlas-3.8.3.p12/ATLAS-build'
> make clean
> make[3]: Entering directory
> `/home/jonhanke/sage-4.5.2/spkg/build/atlas-3.8.3.p12/ATLAS-build'
> rm -f *.o x* config?.out *core*
> make[3]: Leaving directory
> `/home/jonhanke/sage-4.5.2/spkg/build/atlas-3.8.3.p12/ATLAS-build'
> make[2]: Leaving directory
> `/home/jonhanke/sage-4.5.2/spkg/build/atlas-3.8.3.p12/ATLAS-build'
> Finished building ATLAS core
> make[2]: Entering directory
> `/home/jonhanke/sage-4.5.2/spkg/build/atlas-3.8.3.p12/ATLAS-build/lib'
> rm -f libatlas.so liblapack.so
> make libatlas.so liblapack.so libf77blas.so libcblas.so liblapack.so
> make[3]: Entering directory
> `/home/jonhanke/sage-4.5.2/spkg/build/atlas-3.8.3.p12/ATLAS-build/lib'
> ld -melf_x86_64 -shared -soname libatlas.so -o libatlas.so \
>         --whole-archive libatlas.a --no-whole-archive -lc -lm
> ld -melf_x86_64 -shared -soname liblapack.so -o liblapack.so --whole-archive
> \
>            liblapack.a --no-whole-archive
> make[3]: *** No rule to make target `libf77blas.a', needed by
> `libf77blas.so'.  Stop.
> make[3]: Leaving directory
> `/home/jonhanke/sage-4.5.2/spkg/build/atlas-3.8.3.p12/ATLAS-build/lib'
> make[2]: *** [shared] Error 2
> make[2]: Leaving directory
> `/home/jonhanke/sage-4.5.2/spkg/build/atlas-3.8.3.p12/ATLAS-build/lib'
> Building shared ATLAS libraries failed
> Failed to build ATLAS.
>
> real    10m24.087s
> user    8m38.823s
> sys     1m42.460s
> sage: An error occurred while installing atlas-3.8.3.p12
> Please email sage-devel http://groups.google.com/group/sage-devel
> explaining the problem and send the relevant part of
> of /home/jonhanke/sage-4.5.2/install.log.  Describe your computer, operating
> system, etc.
> If you want to try to fix the problem yourself, *don't* just cd to
> /home/jonhanke/sage-4.5.2/spkg/build/atlas-3.8.3.p12 and type 'make check'
> or whatever is appropriate.
> Instead, the following commands setup all environment variables
> correctly and load a subshell for you to debug the error:
> (cd '/home/jonhanke/sage-4.5.2/spkg/build/atlas-3.8.3.p12' &&
> '/home/jonhanke/sage-4.5.2/sage' -sh)
> When you are done debugging, you can type "exit" to leave the
> subshell.
> make[1]: *** [installed/atlas-3.8.3.p12] Error 1
> make[1]: Leaving directory `/home/jonhanke/sage-4.5.2/spkg'
>
> real    17m58.899s
> user    13m25.004s
> sys     4m22.452s
> Error building Sage.
> ./sage -docbuild all html  2>&1 | tee -a dochtml.log
> python: can't open file
> '/home/jonhanke/sage-4.5.2/devel/sage/doc/common/builder.py': [Errno 2] No
> such file or directory
>
> --
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>



-- 
William Stein
Professor of Mathematics
University of Washington
http://wstein.org

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