2010/6/13 ManDay <man...@gmx.net>: > I too haven't got JMol to work in the NB, although it works fine as > the standalone application when run from the commandline. I don't see > how the site you mentioned would help. Installing JAVA was no problem > and it works just fine, including JMol applets on the jmol.sourceforge > site. This is most likely a problem of SAGE. > > I've no ideas how to tackle it. Everything appears to be returned > correctly, from what I can tell, meaning that SAGE provides a JMol > file which says > > set defaultdirectory "sage0-size500-306189399.jmol.zip" > script SCRIPT > > and the according zip-file has the required contents. However, the > console gives out an error saying
Out of curiosity, are you using openjdk with firefox or chromium browser? I opened a bug report at http://icedtea.classpath.org/bugzilla/show_bug.cgi?id=493 where I describe the procedure I used to make openjdk work with chromium, but in sage, jmol for some reason only works with chromium in the tutorial. If I create a new worksheet, I get the errors that appear to be the same you describe (html contents where a jmol input was expected). Also in my case, it appears to be some problem that firefox works around, but I still did not stop to debug the data being sent/received... > FileManager opening > http://localhost:8000/home/admin/0/cells/1/sage0-size500.jmol?1276349004 > script compiler ERROR: command expected > ----line 1 command 1 of /home/admin/0/cells/1/sage0-size500.jmol? > 1276349004: > >>>> <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01//EN"> <<<< > script ERROR: script compiler ERROR: command expected > ----line 1 command 1 of /home/admin/0/cells/1/sage0-size500.jmol? > 1276349004: > >>>> <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01//EN"> <<<< > eval ERROR: > ----line 1 command 1: > script >> "/home/admin/0/cells/1/sage0-size500.jmol? > 1276349004" << > > Any further ideas? > > On May 23, 11:39 pm, Bruce Cohen <math.co...@gmail.com> wrote: >> I found this >> page:http://sites.google.com/site/easylinuxtipsproject/java#TOC-Install-JR... >> to be quite useful. jmolnow works on all my machines (running Ubuntu >> 10.04) >> >> -Bruce >> >> On May 12, 9:07 pm, Bruce Cohen <math.co...@gmail.com> wrote: >> >> >> >> > I have just triedjmolon two machines running 32 bitUbuntu10.04. >> > At the command line >> >> > var('x y') >> > plot3d(x^2+y^2, (x,-2,2), (y,-2,2)) >> >> > works on both machines. >> >> > The same commands in the notebook work fine on the machine with the >> > fresh 10.04 install, but do not work on the one which >> > was upgraded from 9.10. >> >> > On the fresh install, I show this with a url of "about:plugins" >> >> >Java(TM) Plug-in 1.6.0_20 >> >> > File: libnpjp2.so >> > Version: >> > The next generationJavaplug-in for Mozilla browsers. >> >> > -Bruce >> >> > On May 12, 5:05 am, Pablo Angulo <pablo.ang...@uam.es> wrote: >> >> > > My experience before 10.04 was that openjdk worked from the command >> > > line, but not in the notebook. This appeared to be the case. >> > > After reading this thread, I tried to drop my .mozilla folder, which I >> > > have carried for years and now applets do work. More concretely, I >> > > renamed .mozilla into .mozilla-no, and got a freash browser. >> > > I've tried to find the particular file within .mozilla that causes the >> > > trouble, as I want to keep the bookmarks and history, unsuccessfully. Paulo -- To post to this group, send an email to sage-devel@googlegroups.com To unsubscribe from this group, send an email to sage-devel+unsubscr...@googlegroups.com For more options, visit this group at http://groups.google.com/group/sage-devel URL: http://www.sagemath.org
