For 3d plots it's really very similar, but of course they aren't
always png's.  Calling show with viewer="tachyon" just renders a png,
and we're in the above case.  Calling show with no options (no
viewer="tachyon") uses jmol, which means that a certain file type is
output.  The notebook then notices that file was created and embeds a
java jmol applet configured using that file.

Anyway, I'm just hopefully clarifying how things work now.  I'm not
actually answering your questions below though.
--
William Stein
Associate Professor of Mathematics
University of Washington
http://wstein.org

...

That's fine, but after one has displayed 3d plots as well as 2d plots
the
differences are really striking:  the interactive feature of jmol is
too good
to want to give up for other plots.  The OP mentioned mayavi et al
and I'd like to add interactive imaging (resp. image processing) using
PIL for instance.

It would be very nice to be able to display movie clips or real time
images
during image processing, especially in conjunction with the @interact
decorator.  I'm just thinking out loud because everyone who
ultimately
uses jmol plotting is going to want that kind of interactivity in the
notebook
for other kinds of output.

J
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