Robert,

Taking the derivative with respect to a function is
something like

diff(L,u(x,t));

and also

diff(L,diff(u(x,t),t));

where L may contain terms with u(x,t) and diff(u(x,t),t).
So, u(x,t) is a function, not just a symbolic variable.

These terms pop up in the Euler-Lagrange equation which is
at the heart of Calculus of Variations.

I haven't tried to do it in Sage, but I haven't seen any
examples that use it and I couldn't find any Maxima examples
either.

Cheers,

Tim.

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