> [spkg-install] ImportError: cannot import > name > 'is_package_installed_and_updated' from 'sage.misc.package' > (/usr/lib/python3/dist-packages/sage/misc/package.py)
This appears to indicate that you have a dpkg-installed (old) version of Sage, which conflicts with the one you are installing. On 9 November 2024 09:50:05 GMT-06:00, Javier Gomez Serrano <javier_gomez_serr...@brown.edu> wrote: >Thanks! >When using dpkg, pybind11 didn't prompt to that folder. >I tried to uninstall pybind11 and reinstall Sage and it didn't work. >Then I tried to move the folder. The installation still gets stuck. This is >the end of the output: > >```Error building Sage. > >The following package(s) may have failed to build (not necessarily >during this run of 'make all-start'): > >* package: contourpy-1.1.1 >last build time: Nov 9 09:59 >log file: /home/javi/Work/Sage_v2/sage/logs/pkgs/contourpy-1.1.1.log > >* package: scipy-1.12.0 >last build time: Nov 9 10:08 >log file: /home/javi/Work/Sage_v2/sage/logs/pkgs/scipy-1.12.0.log > >* package: sagelib-10.4 >last build time: Nov 9 10:41 >log file: /home/javi/Work/Sage_v2/sage/logs/pkgs/sagelib-10.4.log > >It is safe to delete any log files and build directories, but they >contain information that is helpful for debugging build problems. >WARNING: If you now run 'make' again, the build directory of the >same version of the package will, by default, be deleted. Set the >environment variable SAGE_KEEP_BUILT_SPKGS=yes to prevent this. > >real 0m12.750s user 0m30.931s sys 0m5.747s >make[1]: *** [Makefile:40: all-start] Error 1 >make[1]: Leaving directory '/home/javi/Work/Sage_v2/sage' >``` >It is now failing installing sagelib (I did the folder move between 10:08 >and 10:41). The log is too big to be posted. Here's the end of it: > >************************************************************************ >Setting up build directory >/home/javi/Work/Sage_v2/sage/local/var/lib/sage/venv-python3.12/var/tmp/sage/build/sagelib-10.4 >Host system: Linux Javi-TPX1 6.8.0-48-generic #48-Ubuntu SMP >PREEMPT_DYNAMIC Fri Sep 27 14:04:52 UTC 2024 x86_64 x86_64 x86_64 GNU/Linux >C compiler: gcc, Using built-in specs., COLLECT_GCC=gcc, >COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-linux-gnu/13/lto-wrapper, >OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa, OFFLOAD_TARGET_DEFAULT=1, >Target: x86_64-linux-gnu, Configured with: ../src/configure -v >--with-pkgversion='Ubuntu 13.2.0-23ubuntu4' >--with-bugurl=file:///usr/share/doc/gcc-13/README.Bugs >--enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr >--with-gcc-major-version-only --program-suffix=-13 >--program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id >--libexecdir=/usr/libexec --without-included-gettext --enable-threads=posix >--libdir=/usr/lib --enable-nls --enable-clocale=gnu >--enable-libstdcxx-debug --enable-libstdcxx-time=yes >--with-default-libstdcxx-abi=new --enable-libstdcxx-backtrace >--enable-gnu-unique-object --disable-vtable-verify --enable-plugin >--enable-default-pie --with-system-zlib --enable-libphobos-checking=release >--with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch >--disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 >--with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic >--enable-offload-targets=nvptx-none=/build/gcc-13-uJ7kn6/gcc-13-13.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-13-uJ7kn6/gcc-13-13.2.0/debian/tmp-gcn/usr > >--enable-offload-defaulted --without-cuda-driver --enable-checking=release >--build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu, >Thread model: posix, Supported LTO compression algorithms: zlib zstd, gcc >version 13.2.0 (Ubuntu 13.2.0-23ubuntu4) >No stamp file for package 'sagelib' in >/home/javi/Work/Sage_v2/sage/local/var/lib/sage/venv-python3.12/var/lib/sage/installed >No spkg-legacy-uninstall script; nothing to do >[spkg-install] Installing sagelib-10.4 (editable mode) >[spkg-install] Using pip 24.0 from >/home/javi/Work/Sage_v2/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/pip > >(python 3.12) >[spkg-install] Obtaining file:///home/javi/Work/Sage_v2/sage/src >[spkg-install] Checking if build backend supports build_editable: started >[spkg-install] Running command Checking if build backend supports >build_editable >[spkg-install] Checking if build backend supports build_editable: >finished with status 'done' >[spkg-install] Preparing metadata (pyproject.toml): started >[spkg-install] Running command Preparing metadata (pyproject.toml) >[spkg-install] Traceback (most recent call last): >[spkg-install] File >"/home/javi/Work/Sage_v2/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", > >line 353, in <module> >[spkg-install] main() >[spkg-install] File >"/home/javi/Work/Sage_v2/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", > >line 335, in main >[spkg-install] json_out['return_val'] = hook(**hook_input['kwargs']) >[spkg-install] ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >[spkg-install] File >"/home/javi/Work/Sage_v2/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", > >line 149, in prepare_metadata_for_build_wheel >[spkg-install] return hook(metadata_directory, config_settings) >[spkg-install] ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >[spkg-install] File >"/home/javi/Work/Sage_v2/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/setuptools/build_meta.py", > >line 366, in prepare_metadata_for_build_wheel >[spkg-install] self.run_setup() >[spkg-install] File >"/home/javi/Work/Sage_v2/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/setuptools/build_meta.py", > >line 311, in run_setup >[spkg-install] exec(code, locals()) >[spkg-install] File "<string>", line 21, in <module> >[spkg-install] ImportError: cannot import name >'is_package_installed_and_updated' from 'sage.misc.package' >(/usr/lib/python3/dist-packages/sage/misc/package.py) >[spkg-install] error: subprocess-exited-with-error >[spkg-install] >[spkg-install] × Preparing metadata (pyproject.toml) did not run >successfully. >[spkg-install] │ exit code: 1 >[spkg-install] ╰─> See above for output. >[spkg-install] >[spkg-install] note: This error originates from a subprocess, and is >likely not a problem with pip. >[spkg-install] full command: >/home/javi/Work/Sage_v2/sage/local/var/lib/sage/venv-python3.12/bin/python3 >/home/javi/Work/Sage_v2/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py > >prepare_metadata_for_build_wheel /tmp/tmps_4twkoo >[spkg-install] cwd: /home/javi/Work/Sage_v2/sage/src >[spkg-install] Preparing metadata (pyproject.toml): finished with status >'error' >[spkg-install] error: metadata-generation-failed >[spkg-install] >[spkg-install] × Encountered error while generating package metadata. >[spkg-install] ╰─> See above for output. >[spkg-install] >[spkg-install] note: This is an issue with the package mentioned above, not >pip. >[spkg-install] hint: See above for details. >[spkg-install] >************************************************************************************************************************ >[spkg-install] Error installing sagelib-10.4 >[spkg-install] >************************************************************************************************************************ >************************************************************************ >Error installing package sagelib-10.4 >************************************************************************ >Please email sage-devel (http://groups.google.com/group/sage-devel) >explaining the problem and including the log files > /home/javi/Work/Sage_v2/sage/logs/pkgs/sagelib-10.4.log >and > /home/javi/Work/Sage_v2/sage/config.log >Describe your computer, operating system, etc. >If you want to try to fix the problem yourself, *don't* just cd to >/home/javi/Work/Sage_v2/sage/local/var/lib/sage/venv-python3.12/var/tmp/sage/build/sagelib-10.4 > >and type 'make' or whatever is appropriate. >Instead, the following commands setup all environment variables >correctly and load a subshell for you to debug the error: > (cd >'/home/javi/Work/Sage_v2/sage/local/var/lib/sage/venv-python3.12/var/tmp/sage/build/sagelib-10.4' > >&& '/home/javi/Work/Sage_v2/sage/sage' --buildsh) >When you are done debugging, you can type "exit" to leave the subshell. >************************************************************************ > >Thanks! >Javi > >-- >You received this message because you are subscribed to the Google Groups >"sage-devel" group. >To unsubscribe from this group and stop receiving emails from it, send an >email to sage-devel+unsubscr...@googlegroups.com. >To view this discussion visit >https://groups.google.com/d/msgid/sage-devel/69ae7189-f167-4c44-887a-5e4560500ffcn%40googlegroups.com. -- You received this message because you are subscribed to the Google Groups "sage-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-devel+unsubscr...@googlegroups.com. To view this discussion visit https://groups.google.com/d/msgid/sage-devel/5995C8D1-E1E3-4EC3-A81A-B8B33D47210F%40gmail.com.
