From the log sent to me in a private email:
[sagelib-10.1] gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1
-DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall
-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3
-Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic
-fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection
-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall
-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3
-Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic
-fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection
-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall
-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3
-Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic
-fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -g
-O2 -fPIC -Isage/cpython
-I/home/ayan/programs/sage-10.1/local/var/lib/sage/venv-python3.11/lib64/python3.11/site-packages/cysignals
-I/home/ayan/programs/sage-10.1/src
-I/home/ayan/programs/sage-10.1/local/var/lib/sage/venv-python3.11/lib64/python3.11/site-packages/numpy/core/include
-I/usr/include/python3.11
-I/home/ayan/programs/sage-10.1/local/var/lib/sage/venv-python3.11/include
-I/usr/include/python3.11 -c sage/stats/time_series.c -o
build/temp.linux-x86_64-cpython-311/sage/stats/time_series.o
[sagelib-10.1] /usr/bin/ld: ///usr/local/lib/libntl.a(ZZ.o):
relocation R_X86_64_32S against `.rodata' can not be used when making a
shared object; recompile with -fPIC
[sagelib-10.1] /usr/bin/ld: failed to set dynamic section sizes: bad
value
[sagelib-10.1] collect2: error: ld returned 1 exit status
We are looking at a "local" installation of NTL [not sage provided]
which does not have the right properties.
I would recommend uninstalling it and build the version shipped with sage.
François
On 27/10/23 20:15, Ayan Mahalanobis wrote:
Hi All,
I am trying to build sage 10.1 from source with no luck. I am using
fedora 38. It uses gcc 13. The error occurs when it tries to build
sagelib is below.
This is the command it ran just before exit code 1 from g++. It is nasty
looking and I am sorry for that. Any help much appreciated.
==================================================
gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2
-fexceptions -g -grecord-gcc-switches -pipe -Wall
-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3
-Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic
-fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection
-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall
-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3
-Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic
-fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection
-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall
-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3
-Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic
-fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -g
-O2 -fPIC -I/usr/include/singular -Isage/symbolic -Isage/cpython
-I/home/ayan/programs/sage-10.1/local/var/lib/sage/venv-python3.11/lib64/python3.11/site-packages/cypari2 -I/home/ayan/programs/sage-10.1/local/var/lib/sage/venv-python3.11/lib64/python3.11/site-packages/cysignals -I/home/ayan/programs/sage-10.1/src -I/home/ayan/programs/sage-10.1/local/var/lib/sage/venv-python3.11/lib64/python3.11/site-packages/numpy/core/include -I/usr/include/python3.11 -I/home/ayan/programs/sage-10.1/local/var/lib/sage/venv-python3.11/include -I/usr/include/python3.11 -c sage/symbolic/ginac/wildcard.cpp -o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/wildcard.o -std=c++11 -I/usr/include/singular -DSING_NDEBUG -DOM_NDEBUG
[sagelib-10.1] g++ -std=gnu++11 -shared -Wl,-z,relro -Wl,--as-needed
-Wl,-z,now -Wl,--build-id=sha1 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now
-Wl,--build-id=sha1
-Wl,-rpath-link,/home/ayan/programs/sage-10.1/local/lib
-L/home/ayan/programs/sage-10.1/local/lib
-Wl,-rpath,/home/ayan/programs/sage-10.1/local/lib
-Wl,-rpath-link,/home/ayan/programs/sage-10.1/local/lib
-L/home/ayan/programs/sage-10.1/local/lib
-Wl,-rpath,/home/ayan/programs/sage-10.1/local/lib -g -O2
build/temp.linux-x86_64-cpython-311/sage/symbolic/expression.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/add.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/archive.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/assume.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/basic.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/cmatcher.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/constant.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/context.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/ex.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/expair.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/expairseq.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/exprseq.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/fderivative.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/function.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/function_info.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/infinity.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/infoflagbase.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/inifcns.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/inifcns_comb.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/inifcns_gamma.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/inifcns_hyperb.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/inifcns_hyperg.o
build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/inifcns_nstdsums.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/inifcns_orthopoly.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/inifcns_trans.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/inifcns_trig.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/inifcns_zeta.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/lst.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/matrix.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/mpoly-giac.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/mpoly-ginac.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/mpoly-singular.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/mpoly.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/mul.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/normal.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/numeric.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/operators.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/order.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/power.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/print.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/pseries.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/py_funcs.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/registrar.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/relational.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/remember.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/sum.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/symbol.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/templates.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/upoly-ginac.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/useries.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/utils.o build/temp.linux-x86_64-cpython-311/sage/symbolic/ginac/wildcard.o -L/usr/lib64 -lflint -lgmp -lSingular -lpolys -lfactory -lomalloc -lsingular_resources -lgsl -lm -lopenblas -o build/lib.linux-x86_64-cpython-311/sage/symbolic/expression.cpython-311-x86_64-linux-gnu.so -lpari
[sagelib-10.1] error: command '/usr/bin/g++' failed with exit code 1
[sagelib-10.1] error: subprocess-exited-with-error
[sagelib-10.1]
[sagelib-10.1] × python setup.py develop did not run successfully.
[sagelib-10.1] │ exit code: 1
[sagelib-10.1] ╰─> See above for output.
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