Can you use gsl provided by Conda? If you run can Sage's ./configure with conda active then it will list "system" packages to install.
On Fri, 24 Jul 2020, 16:36 Nathan Dunfield, <nat...@dunfield.info> wrote: > I am trying to build Sage 9.1 from source on Scientific Linux 6.10 > (=Centos 6) using gcc 7.5 provided by Conda, and am having problems getting > gsl to build: > > [gsl-2.5] > /data/keeling/a/nmd/miniconda3/envs/sage_base_lite4/bin/../lib/gcc/x86_64-conda_cos6-linux-gnu/7.5.0/../../../../x86_64-conda_cos6-linux-gnu/bin/ld: > /data/keeling/a/nmd/pkgs/sage-9.1/local/lib/libopenblas.so: undefined > reference to `_gfortran_concat_string' > > Attached are the logs for gsl, openblas, and config. The config command > was: > > ./configure --with-system-gmp=no --with-system-openblas=no > --with-system-gfan=no --with-system-iconv=no --with-system-libffi=no > --with-system-sqlite=no > > Thanks, > > Nathan > > P.S. In case you are wondering why I don't just use Sage via Conda, the > answer is (a) some nodes on this cluster are old enough the Sage-on-conda > binaries occasionally generate exceptions from missing instructions and (b) > I need to install certain Sage optional packages, specifically Normaliz. > > > -- > You received this message because you are subscribed to the Google Groups > "sage-devel" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to sage-devel+unsubscr...@googlegroups.com. > To view this discussion on the web visit > https://groups.google.com/d/msgid/sage-devel/dccc298b-ad86-43af-8d60-74cff1c53f8co%40googlegroups.com > <https://groups.google.com/d/msgid/sage-devel/dccc298b-ad86-43af-8d60-74cff1c53f8co%40googlegroups.com?utm_medium=email&utm_source=footer> > . > -- You received this message because you are subscribed to the Google Groups "sage-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-devel+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-devel/CAAWYfq3mKj5GwW8Z312yEuoZBoP6fwe0FAvsmfJZd-mjeg2C5Q%40mail.gmail.com.
