[sage-devel] Problem installing Cython

VictorMiller Wed, 09 Jan 2008 14:53:11 -0800

I just tried downloading sage-2.9.3 and building it on my system
(value of uname -a is below):


Linux runner 2.6.9-55.0.9.ELsmp #1 SMP Tue Sep 25 02:17:24 EDT 2007
i686 i686 i386 GNU/Linux

I got an error.  As requested, I'm posting the relevant lines.

Victor

sage-spkg cython-0.9.6.9 2>&1
cython-0.9.6.9
Machine:
Linux runner 2.6.9-55.0.9.ELsmp #1 SMP Tue Sep 25 02:17:24 EDT 2007
i686 i686 i386 GNU/Linux
Deleting directories from past builds of previous/current versions of
cython-0.9.6.9
Extracting package /u/victor/sage-2.9.3/spkg/standard/
cython-0.9.6.9.spkg ...
-rw-r--r--  1 victor ccr 1959597 Dec 17 11:17 /u/victor/sage-2.9.3/
spkg/standard/cython-0.9.6.9.spkg
cython-0.9.6.9/
cython-0.9.6.9/._.DS_Store
cython-0.9.6.9/.DS_Store
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cython-0.9.6.9/.hg/dirstate
cython-0.9.6.9/.hg/requires
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cython-0.9.6.9/.hg/store/data/_c_h_a_n_g_e_s__pyrex.txt.i
cython-0.9.6.9/.hg/store/data/_c_o_p_y_i_n_g.txt.i
cython-0.9.6.9/.hg/store/data/_demos/
cython-0.9.6.9/.hg/store/data/_demos/_makefile.i
cython-0.9.6.9/.hg/store/data/_demos/_makefile.nodistutils.i
cython-0.9.6.9/.hg/store/data/_demos/_setup.py.i
cython-0.9.6.9/.hg/store/data/_demos/callback/
cython-0.9.6.9/.hg/store/data/_demos/callback/_makefile.i
cython-0.9.6.9/.hg/store/data/_demos/callback/_makefile.nodistutils.i
cython-0.9.6.9/.hg/store/data/_demos/callback/_r_e_a_d_m_e.txt.i
cython-0.9.6.9/.hg/store/data/_demos/callback/_setup.py.i
cython-0.9.6.9/.hg/store/data/_demos/callback/cheese.pyx.i
cython-0.9.6.9/.hg/store/data/_demos/callback/cheesefinder.c.i
cython-0.9.6.9/.hg/store/data/_demos/callback/cheesefinder.h.i
cython-0.9.6.9/.hg/store/data/_demos/callback/run__cheese.py.i
cython-0.9.6.9/.hg/store/data/_demos/embed/
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cython-0.9.6.9/.hg/store/data/_demos/embed/_makefile.msc.i
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cython-0.9.6.9/.hg/store/data/_demos/embed/_makefile.unix.i
cython-0.9.6.9/.hg/store/data/_demos/embed/_r_e_a_d_m_e.i
cython-0.9.6.9/.hg/store/data/_demos/embed/embedded.pyx.i
cython-0.9.6.9/.hg/store/data/_demos/embed/main.c.i
cython-0.9.6.9/.hg/store/data/_demos/numeric__demo.pyx.i
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cython-0.9.6.9/.hg/store/data/_demos/pyprimes.py.i
cython-0.9.6.9/.hg/store/data/_demos/run__numeric__demo.py.i
cython-0.9.6.9/.hg/store/data/_demos/run__primes.py.i
cython-0.9.6.9/.hg/store/data/_demos/run__spam.py.i
cython-0.9.6.9/.hg/store/data/_demos/spam.pyx.i
cython-0.9.6.9/.hg/store/data/_doc/
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cython-0.9.6.9/.hg/store/data/_doc/_f_a_q.html.i
cython-0.9.6.9/.hg/store/data/_doc/extension__types.html.i
cython-0.9.6.9/.hg/store/data/_doc/index.html.i
cython-0.9.6.9/.hg/store/data/_doc/overview.html.i
cython-0.9.6.9/.hg/store/data/_doc/primes.c.i
cython-0.9.6.9/.hg/store/data/_doc/sharing.html.i
cython-0.9.6.9/.hg/store/data/_doc/special__methods.html.i
cython-0.9.6.9/.hg/store/data/_i_n_s_t_a_l_l.txt.i
cython-0.9.6.9/.hg/store/data/_includes/
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cython-0.9.6.9/.hg/store/data/_includes/python__dict.pxi.i
cython-0.9.6.9/.hg/store/data/_includes/python__exc.pxi.i
cython-0.9.6.9/.hg/store/data/_includes/python__float.pxi.i
cython-0.9.6.9/.hg/store/data/_includes/python__function.pxi.i
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cython-0.9.6.9/.hg/store/data/_includes/python__int.pxi.i
cython-0.9.6.9/.hg/store/data/_includes/python__iterator.pxi.i
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cython-0.9.6.9/.hg/store/data/_includes/python__long.pxi.i
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cython-0.9.6.9/.hg/store/data/_includes/python__number.pxi.i
cython-0.9.6.9/.hg/store/data/_includes/python__object.pxi.i
cython-0.9.6.9/.hg/store/data/_includes/python__parse.pxi.i
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cython-0.9.6.9/.hg/store/data/_l_i_c_e_n_s_e.txt.i
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cython-0.9.6.9/.hg/store/data/_makefile.i
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cython-0.9.6.9/.hg/store/data/bin/
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cython-0.9.6.9/bin/
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cython-0.9.6.9/Cython/.hg/data/Compiler/Lexicon.py.i
cython-0.9.6.9/Cython/.hg/data/Compiler/Main.py.i
cython-0.9.6.9/Cython/.hg/data/Compiler/ModuleNode.py.i
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cython-0.9.6.9/Cython/.hg/data/Compiler/Nodes.py.i
cython-0.9.6.9/Cython/.hg/data/Compiler/Options.py.i
cython-0.9.6.9/Cython/.hg/data/Compiler/Parsing.py.i
cython-0.9.6.9/Cython/.hg/data/Compiler/PyrexTypes.py.i
cython-0.9.6.9/Cython/.hg/data/Compiler/Scanning.py.i
cython-0.9.6.9/Cython/.hg/data/Compiler/Symtab.py.i
cython-0.9.6.9/Cython/.hg/data/Compiler/TypeSlots.py.i
cython-0.9.6.9/Cython/.hg/data/Compiler/Version.py.i
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cython-0.9.6.9/Includes/python_long.pxi
cython-0.9.6.9/Includes/python_mapping.pxi
cython-0.9.6.9/Includes/python_mem.pxi
cython-0.9.6.9/Includes/python_method.pxi
cython-0.9.6.9/Includes/python_module.pxi
cython-0.9.6.9/Includes/python_number.pxi
cython-0.9.6.9/Includes/python_object.pxi
cython-0.9.6.9/Includes/python_parse.pxi
cython-0.9.6.9/Includes/python_ref.pxi
cython-0.9.6.9/Includes/python_sequence.pxi
cython-0.9.6.9/Includes/python_set.pxi
cython-0.9.6.9/Includes/python_string.pxi
cython-0.9.6.9/Includes/python_tuple.pxi
cython-0.9.6.9/Includes/python_type.pxi
cython-0.9.6.9/Includes/stdio.pxi
cython-0.9.6.9/Includes/stdlib.pxi
cython-0.9.6.9/INSTALL.txt
cython-0.9.6.9/LICENSE.txt
cython-0.9.6.9/Makefile
cython-0.9.6.9/MANIFEST
cython-0.9.6.9/MANIFEST.in
cython-0.9.6.9/README.txt
cython-0.9.6.9/setup.py
cython-0.9.6.9/ToDo.txt
cython-0.9.6.9/Tools/
cython-0.9.6.9/Tools/cython-mode.el
cython-0.9.6.9/Tools/cython.st
cython-0.9.6.9/USAGE.txt
Finished extraction
****************************************************
Host system
uname -a:
Linux runner 2.6.9-55.0.9.ELsmp #1 SMP Tue Sep 25 02:17:24 EDT 2007
i686 i686 i386 GNU/Linux
****************************************************
****************************************************
GCC Version
gcc -v
Reading specs from /usr/lib/gcc/i386-redhat-linux/3.4.6/specs
Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --
infodir=/usr/share/info --enable-shared --enable-threads=posix --
disable-checking --with-system-zlib --enable-__cxa_atexit --disable-
libunwind-exceptions --enable-java-awt=gtk --host=i386-redhat-linux
Thread model: posix
gcc version 3.4.6 20060404 (Red Hat 3.4.6-8)
****************************************************
Traceback (most recent call last):
  File "setup.py", line 1, in ?
    from distutils.core import setup
  File "/u/victor/sage-2.9.3/local/lib/python/distutils/core.py", line
21, in ?
    from distutils.dist import Distribution
  File "/u/victor/sage-2.9.3/local/lib/python/distutils/dist.py", line
16, in ?
    import warnings
  File "/u/victor/sage-2.9.3/local/lib/python/warnings.py", line 264,
in ?
    simplefilter("ignore", category=ImportWarning, append=1)
NameError: name 'ImportWarning' is not defined

real    0m0.595s
user    0m0.201s
sys     0m0.100s
sage: An error occurred while installing cython-0.9.6.9
Please email sage-devel http://groups.google.com/group/sage-devel
explaining the problem and send the relevant part of
of /u/victor/sage-2.9.3/install.log.  Describe your computer,
operating system, etc.
If you want to try to fix the problem, yourself *don't* just cd to
/u/victor/sage-2.9.3/spkg/build/cython-0.9.6.9 and type 'make'.
Instead type "/u/victor/sage-2.9.3/sage -sh"
in order to set all environment variables correctly, then cd to
/u/victor/sage-2.9.3/spkg/build/cython-0.9.6.9
(When you are done debugging, you can type "exit" to leave the
subshell.)
make[1]: *** [installed/cython-0.9.6.9] Error 1
make[1]: Leaving directory `/net/u/victor/sage-2.9.3/spkg'

real    76m10.577s
user    52m5.726s
sys     16m47.079s

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[sage-devel] Problem installing Cython

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