That's an error in a different place. We are progressing....
Try again:
pip install https://bitbucket.org/lgautier/rpy2/get/version_2.5.x.tar.gz
2014-12-12 22:15 GMT-05:00 Xinxin Peng <fred...@gmail.com>:
>
> Hi Lanrent,
>
> Error report still exists.
>
> Traceback (most recent call last):
> File "setup.py", line 280, in <module>
> ri_ext = getRinterface_ext()
> File "setup.py", line 202, in getRinterface_ext
> include_dirs.extend(args.I)
> TypeError: 'NoneType' object is not iterable
>
>
> Thanks a lot.
> Xinxin
>
> On Sat, Dec 13, 2014 at 10:49 AM, Laurent Gautier <lgaut...@gmail.com>
> wrote:
>>
>> Typo in the fix.
>>
>> Try a snapshot from bitbucket:
>>
>> pip install https://bitbucket.org/lgautier/rpy2/get/version_2.5.x.tar.gz
>>
>>
>> 2014-12-12 21:08 GMT-05:00 Xinxin Peng <fred...@gmail.com>:
>>
>>> Hi Laurent,
>>>
>>> The newly released package still doesn't seem to work for me.
>>> This time I ran into different errors.
>>>
>>> Traceback (most recent call last):
>>> File "setup.py", line 280, in <module>
>>> ri_ext = getRinterface_ext()
>>> File "setup.py", line 190, in getRinterface_ext
>>> ldf = shlex.split(' '.join(rexec.cmd_config('--ldflags')))
>>> File "setup.py", line 134, in cmd_config
>>> warnings.warning("R emitting a warning: %s" % output[0])
>>> AttributeError: 'module' object has no attribute 'warning'
>>>
>>> Thanks a lot.
>>> Xinxin
>>>
>>>
>>> On Sat, Dec 13, 2014 at 2:07 AM, Laurent Gautier <lgaut...@gmail.com>
>>> wrote:
>>>>
>>>> rpy2-2.5.3 is now on Pypi. Try:
>>>> pip install rpy2 --upgrade
>>>>
>>>> 2014-12-12 12:48 GMT-05:00 Ian York <iay...@iayork.com>:
>>>>
>>>>> For what it's worth, I noted the same bug a couple weeks ago. In case
>>>>> it didn't go through, I said:
>>>>>
>>>>> I have installed rpy2 on this machine in the past and had no problems,
>>>>> but now I am unable to get rpy2 properly installed either using pip or
>>>>> source. I'm running OSX 10.9.5 (Mavericks), and R version 3.1.1
>>>>> (2014-07-10) -- "Sock it to Me" (Platform: x86_64-apple-darwin13.1.0
>>>>> (64-bit)).
>>>>>
>>>>> Both source and pip show similar errors. For example, when I try
>>>>>
>>>>> pip install
>>>>> https://bitbucket.org/lgautier/rpy2/get/version_2.5.x.tar.gz
>>>>>
>>>>> I get the following traceback:
>>>>>
>>>>> -------------------------------------------------
>>>>>
>>>>> Traceback (most recent call last):
>>>>> File "<string>", line 17, in <module>
>>>>> File
>>>>> "/var/folders/7h/kxq84vrx6cq4mh8ycssjhzc4y2bpx0/T/pip-M_AK2m-build/setup.py",
>>>>> line 275, in <module>
>>>>> ri_ext = getRinterface_ext()
>>>>> File
>>>>> "/var/folders/7h/kxq84vrx6cq4mh8ycssjhzc4y2bpx0/T/pip-M_AK2m-build/setup.py",
>>>>> line 189, in getRinterface_ext
>>>>> ldf = shlex.split(' '.join(rexec.cmd_config('--ldflags')))
>>>>> File
>>>>> "/var/folders/7h/kxq84vrx6cq4mh8ycssjhzc4y2bpx0/T/pip-M_AK2m-build/setup.py",
>>>>> line 135, in cmd_config
>>>>> output = output.strip()
>>>>> AttributeError: 'list' object has no attribute 'strip'
>>>>> -------------------------------------------------
>>>>>
>>>>> (I used https://bitbucket.org/lgautier/rpy2/get/version_2.5.x.tar.gz
>>>>> because I was seeing a separate error before this, and while trying to
>>>>> find a solution to that one I saw the suggestion to use
>>>>> https://bitbucket.org/lgautier/rpy2/get/version_2.5.x.tar.gz. That
>>>>> eliminated the previous error but brought in the "strip" error.)
>>>>>
>>>>> On trying to install from source (rpy2 2.5.1)
>>>>>
>>>>> I get a similar error:
>>>>> -------------------------------------------------
>>>>>
>>>>> ~/Downloads/rpy2-2.5.1 > python setup.py build install
>>>>> R version 3.1.1 (2014-07-10) -- "Sock it to Me"
>>>>> /Library/Frameworks/R.framework/Resources/bin/R CMD config --ldflags
>>>>> Traceback (most recent call last):
>>>>> File "setup.py", line 278, in <module>
>>>>> ri_ext = getRinterface_ext()
>>>>> File "setup.py", line 192, in getRinterface_ext
>>>>> ldf = shlex.split(' '.join(rexec.cmd_config('--ldflags')))
>>>>> File "setup.py", line 135, in cmd_config
>>>>> output = output.strip()
>>>>> AttributeError: 'list' object has no attribute 'strip'
>>>>>
>>>>> -------------------------------------------------
>>>>>
>>>>> I made a guess that the offending line should be output[0].strip() but
>>>>> then I got the following error:
>>>>>
>>>>> -------------------------------------------------
>>>>>
>>>>> Traceback (most recent call last):
>>>>> File "setup.py", line 280, in <module>
>>>>> ri_ext = getRinterface_ext()
>>>>> File "setup.py", line 206, in getRinterface_ext
>>>>> include_dirs.extend(args.I)
>>>>> TypeError: 'NoneType' object is not iterable
>>>>>
>>>>> -------------------------------------------------
>>>>>
>>>>> Suggestions welcome.
>>>>>
>>>>> On Fri, Dec 12, 2014 at 12:33 PM, Laurent Gautier <lgaut...@gmail.com>
>>>>> wrote:
>>>>> > This might be a genuine bug.
>>>>> >
>>>>> > I opened an issue:
>>>>> >
>>>>> https://bitbucket.org/lgautier/rpy2/issue/247/error-when-getting-the-r-configuration-and
>>>>> >
>>>>> > 2014-12-12 7:21 GMT-05:00 Laurent Gautier <lgaut...@gmail.com>:
>>>>> >>
>>>>> >> Hi,
>>>>> >>
>>>>> >> This might be a bug in the install script. Consider opening an
>>>>> issue on
>>>>> >> bitbucket.
>>>>> >>
>>>>> >> Thanks,
>>>>> >>
>>>>> >> Laurent
>>>>> >>
>>>>> >> On Dec 12, 2014 3:57 AM, "Xinxin Peng" <fred...@gmail.com> wrote:
>>>>> >>>
>>>>> >>> Hi all,
>>>>> >>>
>>>>> >>> I have been trying to install rpy2-2.5.2 on a high performance
>>>>> computer
>>>>> >>> and run into the following errors:
>>>>> >>>
>>>>> >>> Traceback (most recent call last):
>>>>> >>> File "setup.py", line 275, in <module>
>>>>> >>> ri_ext = getRinterface_ext()
>>>>> >>> File "setup.py", line 189, in getRinterface_ext
>>>>> >>> ldf = shlex.split(' '.join(rexec.cmd_config('--ldflags')))
>>>>> >>> File "setup.py", line 135, in cmd_config
>>>>> >>> output = output.strip()
>>>>> >>> AttributeError: 'list' object has no attribute 'strip'
>>>>> >>>
>>>>> >>>
>>>>> >>> The python version is python2.7. And the R version is R3.1.1.
>>>>> >>>
>>>>> >>> Any suggestion is welcome.
>>>>> >>>
>>>>> >>> Thanks a lot.
>>>>> >>>
>>>>> >>> Best,
>>>>> >>> Xinxin
>>>>> >>>
>>>>> >>>
>>>>> >>>
>>>>> >>>
>>>>> >>>
>>>>> ------------------------------------------------------------------------------
>>>>> >>> Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server
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>>>>> >>> https://lists.sourceforge.net/lists/listinfo/rpy-list
>>>>> >>>
>>>>> >
>>>>> >
>>>>> ------------------------------------------------------------------------------
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>>>>> > from Actuate! Instantly Supercharge Your Business Reports and
>>>>> Dashboards
>>>>> > with Interactivity, Sharing, Native Excel Exports, App Integration &
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>>>>> >
>>>>>
>>>>>
>>>>>
>>>>> --
>>>>> Ian York (iay...@iayork.com) <http://www.iayork.com/>
>>>>> "-but as he was a York, I am rather inclined to suppose him a
>>>>> very respectable Man." -Jane Austen, The History of England
>>>>>
>>>>>
>>>>> ------------------------------------------------------------------------------
>>>>> Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server
>>>>> from Actuate! Instantly Supercharge Your Business Reports and
>>>>> Dashboards
>>>>> with Interactivity, Sharing, Native Excel Exports, App Integration &
>>>>> more
>>>>> Get technology previously reserved for billion-dollar corporations,
>>>>> FREE
>>>>>
>>>>> http://pubads.g.doubleclick.net/gampad/clk?id=164703151&iu=/4140/ostg.clktrk
>>>>> _______________________________________________
>>>>> rpy-list mailing list
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>>>>> https://lists.sourceforge.net/lists/listinfo/rpy-list
>>>>>
>>>>
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