Nathaniel Smith wrote: > On Mon, Mar 23, 2009 at 5:31 PM, Brandon Invergo > <bran...@brandoninvergo.com> wrote: >> The data is loaded as expected, but when I try to >> print the output to the console, only a portion of the data.frame is >> printed (~65000 characters), presumably because it reached the maximum >> string size, and then a seemingly-unrelated GTK widget breaks (but we'll >> ignore that part for now) > > Hard to tell what exactly's going on from here, but Python itself is > quite happy to create and manipulate strings much larger than 65k -- > its maximum is somewhere in the gigabytes range, if that. (That's a > suspicious number, though -- perhaps some of your widgetry somewhere > has a 2**16 limit?)
What is going on is not clear, but the reason might somewhere else than in the widget. I tried with the GTK console at: http://bitbucket.org/lgautier/rpy2/src/813a7bc798ae/demos/radmin.py as well and in a Python console with: import rpy2.robjects as ro gaus = ro.r['rnorm'](70000) print(gaus) The printed vector is apparently truncated (while it is not when printed from a genuine R console). >> What seems ideal to me would be a way to grab the R console output one >> line at a time rather than all at once so I can just append those lines >> individually to my gtk text buffer. I can easily do this for a specific >> task, such as only for a data.frame, programmatically break it apart by >> rows. However, I'm hoping for something more general that could apply to >> any output. Erh... did you check the example ? http://bitbucket.org/lgautier/rpy2/src/813a7bc798ae/demos/radmin.py It seems to be doing what you are looking for. >> I have tried to set robjects.rinterface.setWriteConsole(f) to some >> function f that just appends to a buffer, but that console callback >> function doesn't seem to append anything to the buffer if I do a call to >> robjects.r("some command here"). > > robjects.r("foo") doesn't print anything itself. (Unless 'foo' calls > the print() function.) Try robjects.r("print(foo)") or > robjects.r["print"](robjects.r("foo")). The confusion might occur because genuine R console calls print on an object (a bit like a Python console calls the method __repr__() ). L. > -- Nathaniel > > ------------------------------------------------------------------------------ > Apps built with the Adobe(R) Flex(R) framework and Flex Builder(TM) are > powering Web 2.0 with engaging, cross-platform capabilities. Quickly and > easily build your RIAs with Flex Builder, the Eclipse(TM)based development > software that enables intelligent coding and step-through debugging. > Download the free 60 day trial. http://p.sf.net/sfu/www-adobe-com > _______________________________________________ > rpy-list mailing list > rpy-list@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/rpy-list ------------------------------------------------------------------------------ Apps built with the Adobe(R) Flex(R) framework and Flex Builder(TM) are powering Web 2.0 with engaging, cross-platform capabilities. Quickly and easily build your RIAs with Flex Builder, the Eclipse(TM)based development software that enables intelligent coding and step-through debugging. Download the free 60 day trial. http://p.sf.net/sfu/www-adobe-com _______________________________________________ rpy-list mailing list rpy-list@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rpy-list
