Support Requests item #2095242, was opened at 2008-09-05 17:50
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Category: Install Problem (example)
Group: None
Status: Open
Priority: 5
Private: No
Submitted By: dawe (daweonline)
Assigned to: Nobody/Anonymous (nobody)
Summary: Again RPy on Freebsd
Initial Comment:
Hi all, I've installed R 2.7.1 on FreeBSD 6.3.
After that I've installed rpy1.0.3 with python 2.5.
I have this error and it seems I'm not the only one.
I don't ask for a ready solution, although it would be great, I just want
somebody to help me to figure out what this error means:
>>> from rpy import *
*** caught segfault ***
address 0x54d8, cause 'unknown'
Traceback:
1: .Call("R_initMethodDispatch", as.environment(where), PACKAGE = "methods")
2: initMethodDispatch(where)
3: ..First.lib(libname, pkgName, env)
4: fun(...)
5: doTryCatch(return(expr), name, parentenv, handler)
6: tryCatchOne(expr, names, parentenv, handlers[[1]])
7: tryCatchList(expr, classes, parentenv, handlers)
8: tryCatch(expr, error = function(e) { call <- conditionCall(e) if
(!is.null(call)) { if (identical(call[[1]], quote(doTryCatch)))
call <- sys.call(-4) dcall <- deparse(call)[1] prefix <-
paste("Error in", dcall, ": ") LONG <- 75 msg <-
conditionMessage(e) sm <- strsplit(msg, "\n")[[1]] if (14 +
nchar(dcall, type = "w") + nchar(sm[1], type = "w") > LONG)
prefix <- paste(prefix, "\n ", sep = "") } else prefix <- "Error : "
msg <- paste(prefix, conditionMessage(e), "\n", sep = "")
.Internal(seterrmessage(msg[1])) if (!silent &&
identical(getOption("show.error.messages"), TRUE)) { cat(msg,
file = stderr()) .Internal(printDeferredWarnings()) }
invisible(structure(msg, class = "try-error"))})
9: try({ fun(...) NULL})
10: runHook(".onLoad", package, env, package.lib, package)
11: loadNamespace(package, c(which.lib.loc, lib.loc), keep.source = keep.source)
12: doTryCatch(return(expr), name, parentenv, handler)
13: tryCatchOne(expr, names, parentenv, handlers[[1]])
14: tryCatchList(expr, classes, parentenv, handlers)
15: tryCatch(expr, error = function(e) { call <- conditionCall(e) if
(!is.null(call)) { if (identical(call[[1]], quote(doTryCatch)))
call <- sys.call(-4) dcall <- deparse(call)[1] prefix <-
paste("Error in", dcall, ": ") LONG <- 75 msg <-
conditionMessage(e) sm <- strsplit(msg, "\n")[[1]] if (14 +
nchar(dcall, type = "w") + nchar(sm[1], type = "w") > LONG)
prefix <- paste(prefix, "\n ", sep = "") } else prefix <- "Error : "
msg <- paste(prefix, conditionMessage(e), "\n", sep = "")
.Internal(seterrmessage(msg[1])) if (!silent &&
identical(getOption("show.error.messages"), TRUE)) { cat(msg,
file = stderr()) .Internal(printDeferredWarnings()) }
invisible(structure(msg, class = "try-error"))})
16: try({ ns <- loadNamespace(package, c(which.lib.loc, lib.loc),
keep.source = keep.source) dataPath <- file.path(which.lib.loc, package,
"data") env <- attachNamespace(ns, pos = pos, dataPath = dataPath)})
17: library(package, lib.loc = lib.loc, character.only = TRUE, logical.return =
TRUE, warn.conflicts = warn.conflicts, keep.source = keep.source,
version = version)
18: require("methods", quietly = TRUE, warn.conflicts = FALSE, character.only =
TRUE, save = FALSE)
19: .OptRequireMethods()
Possible actions:
1: abort (with core dump, if enabled)
2: normal R exit
3: exit R without saving workspace
4: exit R saving workspace
Selection: 2
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