Bugs item #1776119, was opened at 2007-08-17 05:52 Message generated for change (Comment added) made by warnes You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=453021&aid=1776119&group_id=48422
Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Build Group: None >Status: Closed >Resolution: Fixed Priority: 5 Private: No Submitted By: Reinder (rbrolsma) >Assigned to: Gregory Warnes (warnes) Summary: building/importing rpy-1.0-RC3 on windows XP Initial Comment: I have always used rpy in combination with python 2.4 and numarray. Where I used the windows installer to install the packages. This always worked fine In an attempt to stay 'up to date' I am trying to use rpy in combination with python 2.5 and numpy on Windows XP. I tried to build the package but I get the following messages: D:\rpy-1.0-RC3>c:\python25\python setup.py build -c cygwin RHOMES= [] Setting RHOMES to [u'C:\\Program Files\\R\\R-2.3.1', u'C:\\Program Files\\R\\R- 2.4.1', u'C:\\Program Files\\R\\R-2.5.1'] ### Using R verion 2.3.1 installed at C:\Program Files\R\R-2.3.1 ### RHOME= C:\Program Files\R\R-2.3.1 copying src/rpymodule.c -> src/rpymodule2031.c copying src/R_eval.c -> src/R_eval2031.c copying src/io.c -> src/io2031.c c:\python25\lib\site-packages\numpy\lib\utils.py:89: DeprecationWarning: get_num py_include is deprecated, use get_include DeprecationWarning) ### Using R verion 2.4.1 installed at C:\Program Files\R\R-2.4.1 ### RHOME= C:\Program Files\R\R-2.4.1 copying src/rpymodule.c -> src/rpymodule2041.c copying src/R_eval.c -> src/R_eval2041.c copying src/io.c -> src/io2041.c ### Using R verion 2.5.1 installed at C:\Program Files\R\R-2.5.1 ### RHOME= C:\Program Files\R\R-2.5.1 copying src/rpymodule.c -> src/rpymodule2051.c copying src/R_eval.c -> src/R_eval2051.c copying src/io.c -> src/io2051.c running build running build_py running build_ext D:\rpy-1.0-RC3>c:\python25\python setup.py build -c cygwin RHOMES= [] Setting RHOMES to [u'C:\\Program Files\\R\\R-2.3.1', u'C:\\Program Files\\R\\R- 2.4.1', u'C:\\Program Files\\R\\R-2.5.1'] ### Using R verion 2.3.1 installed at C:\Program Files\R\R-2.3.1 ### RHOME= C:\Program Files\R\R-2.3.1 copying src/rpymodule.c -> src/rpymodule2031.c copying src/R_eval.c -> src/R_eval2031.c copying src/io.c -> src/io2031.c c:\python25\lib\site-packages\numpy\lib\utils.py:89: DeprecationWarning: get_num py_include is deprecated, use get_include DeprecationWarning) ### Using R verion 2.4.1 installed at C:\Program Files\R\R-2.4.1 ### RHOME= C:\Program Files\R\R-2.4.1 copying src/rpymodule.c -> src/rpymodule2041.c copying src/R_eval.c -> src/R_eval2041.c copying src/io.c -> src/io2041.c ### Using R verion 2.5.1 installed at C:\Program Files\R\R-2.5.1 ### RHOME= C:\Program Files\R\R-2.5.1 copying src/rpymodule.c -> src/rpymodule2051.c copying src/R_eval.c -> src/R_eval2051.c copying src/io.c -> src/io2051.c running build running build_py creating build creating build\lib.win32-2.5 copying rpy.py -> build\lib.win32-2.5 copying rpy_io.py -> build\lib.win32-2.5 copying rpy_version.py -> build\lib.win32-2.5 copying rpy_tools.py -> build\lib.win32-2.5 copying rpy_options.py -> build\lib.win32-2.5 copying rpy_wintools.py -> build\lib.win32-2.5 running build_ext building '_rpy2031' extension creating build\temp.win32-2.5 creating build\temp.win32-2.5\Release creating build\temp.win32-2.5\Release\src C:\mingw\bin\gcc.exe -mcygwin -mdll -O -Wall -DWITH_NUMERIC=3 -DPY_ARRAY_TYPES_P REFIX=PyArray_ -DRPY_SHNAME=_rpy2031 -DINIT_RPY=init_rpy2031 -UPRE_2_2 "-IC:\Pro gram Files\R\R-2.3.1\include" -Isrc -Ic:\python25\lib\site-packages\numpy\core\i nclude -Ic:\python25\include -Ic:\python25\PC -c src/rpymodule2031.c -o build\te mp.win32-2.5\Release\src\rpymodule2031.o src/rpymodule2031.c:1321: warning: `intargfunc' is deprecated (declared at c:/py thon25/include/object.h:133) C:\mingw\bin\gcc.exe -mcygwin -mdll -O -Wall -DWITH_NUMERIC=3 -DPY_ARRAY_TYPES_P REFIX=PyArray_ -DRPY_SHNAME=_rpy2031 -DINIT_RPY=init_rpy2031 -UPRE_2_2 "-IC:\Pro gram Files\R\R-2.3.1\include" -Isrc -Ic:\python25\lib\site-packages\numpy\core\i nclude -Ic:\python25\include -Ic:\python25\PC -c src/R_eval2031.c -o build\temp. win32-2.5\Release\src\r_eval2031.o c:/python25/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:944: w arning: '_import_array' defined but not used C:\mingw\bin\gcc.exe -mcygwin -mdll -O -Wall -DWITH_NUMERIC=3 -DPY_ARRAY_TYPES_P REFIX=PyArray_ -DRPY_SHNAME=_rpy2031 -DINIT_RPY=init_rpy2031 -UPRE_2_2 "-IC:\Pro gram Files\R\R-2.3.1\include" -Isrc -Ic:\python25\lib\site-packages\numpy\core\i nclude -Ic:\python25\include -Ic:\python25\PC -c src/io2031.c -o build\temp.win3 2-2.5\Release\src\io2031.o c:/python25/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:944: w arning: '_import_array' defined but not used C:\mingw\bin\gcc.exe -mcygwin -mdll -O -Wall -DWITH_NUMERIC=3 -DPY_ARRAY_TYPES_P REFIX=PyArray_ -DRPY_SHNAME=_rpy2031 -DINIT_RPY=init_rpy2031 -UPRE_2_2 "-IC:\Pro gram Files\R\R-2.3.1\include" -Isrc -Ic:\python25\lib\site-packages\numpy\core\i nclude -Ic:\python25\include -Ic:\python25\PC -c src\setenv.c -o build\temp.win3 2-2.5\Release\src\setenv.o writing build\temp.win32-2.5\Release\src\_rpy2031.def C:\mingw\bin\gcc.exe -mcygwin -shared -s build\temp.win32-2.5\Release\src\rpymod ule2031.o build\temp.win32-2.5\Release\src\r_eval2031.o build\temp.win32-2.5\Rel ease\src\io2031.o build\temp.win32-2.5\Release\src\setenv.o build\temp.win32-2.5 \Release\src\_rpy2031.def "-LC:\Program Files\R\R-2.3.1\bin" "-LC:\Program Files \R\R-2.3.1\lib" -Lc:\python25\libs -Lc:\python25\PCBuild -lR -lpython25 -lmsvcr7 1 -o build\lib.win32-2.5\_rpy2031.pyd building '_rpy2041' extension C:\mingw\bin\gcc.exe -mcygwin -mdll -O -Wall -DWITH_NUMERIC=3 -DPY_ARRAY_TYPES_P REFIX=PyArray_ -DRPY_SHNAME=_rpy2041 -DINIT_RPY=init_rpy2041 -UPRE_2_2 "-IC:\Pro gram Files\R\R-2.4.1\include" -Isrc -Ic:\python25\lib\site-packages\numpy\core\i nclude -Ic:\python25\include -Ic:\python25\PC -c src/rpymodule2041.c -o build\te mp.win32-2.5\Release\src\rpymodule2041.o src/rpymodule2041.c:1321: warning: `intargfunc' is deprecated (declared at c:/py thon25/include/object.h:133) C:\mingw\bin\gcc.exe -mcygwin -mdll -O -Wall -DWITH_NUMERIC=3 -DPY_ARRAY_TYPES_P REFIX=PyArray_ -DRPY_SHNAME=_rpy2041 -DINIT_RPY=init_rpy2041 -UPRE_2_2 "-IC:\Pro gram Files\R\R-2.4.1\include" -Isrc -Ic:\python25\lib\site-packages\numpy\core\i nclude -Ic:\python25\include -Ic:\python25\PC -c src/R_eval2041.c -o build\temp. win32-2.5\Release\src\r_eval2041.o c:/python25/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:944: w arning: '_import_array' defined but not used C:\mingw\bin\gcc.exe -mcygwin -mdll -O -Wall -DWITH_NUMERIC=3 -DPY_ARRAY_TYPES_P REFIX=PyArray_ -DRPY_SHNAME=_rpy2041 -DINIT_RPY=init_rpy2041 -UPRE_2_2 "-IC:\Pro gram Files\R\R-2.4.1\include" -Isrc -Ic:\python25\lib\site-packages\numpy\core\i nclude -Ic:\python25\include -Ic:\python25\PC -c src/io2041.c -o build\temp.win3 2-2.5\Release\src\io2041.o c:/python25/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:944: w arning: '_import_array' defined but not used writing build\temp.win32-2.5\Release\src\_rpy2041.def C:\mingw\bin\gcc.exe -mcygwin -shared -s build\temp.win32-2.5\Release\src\rpymod ule2041.o build\temp.win32-2.5\Release\src\r_eval2041.o build\temp.win32-2.5\Rel ease\src\io2041.o build\temp.win32-2.5\Release\src\setenv.o build\temp.win32-2.5 \Release\src\_rpy2041.def "-LC:\Program Files\R\R-2.4.1\bin" "-LC:\Program Files \R\R-2.4.1\lib" -Lc:\python25\libs -Lc:\python25\PCBuild -lR -lpython25 -lmsvcr7 1 -o build\lib.win32-2.5\_rpy2041.pyd building '_rpy2051' extension C:\mingw\bin\gcc.exe -mcygwin -mdll -O -Wall -DWITH_NUMERIC=3 -DPY_ARRAY_TYPES_P REFIX=PyArray_ -DRPY_SHNAME=_rpy2051 -DINIT_RPY=init_rpy2051 -UPRE_2_2 "-IC:\Pro gram Files\R\R-2.5.1\include" -Isrc -Ic:\python25\lib\site-packages\numpy\core\i nclude -Ic:\python25\include -Ic:\python25\PC -c src/rpymodule2051.c -o build\te mp.win32-2.5\Release\src\rpymodule2051.o src/rpymodule2051.c:1321: warning: `intargfunc' is deprecated (declared at c:/py thon25/include/object.h:133) C:\mingw\bin\gcc.exe -mcygwin -mdll -O -Wall -DWITH_NUMERIC=3 -DPY_ARRAY_TYPES_P REFIX=PyArray_ -DRPY_SHNAME=_rpy2051 -DINIT_RPY=init_rpy2051 -UPRE_2_2 "-IC:\Pro gram Files\R\R-2.5.1\include" -Isrc -Ic:\python25\lib\site-packages\numpy\core\i nclude -Ic:\python25\include -Ic:\python25\PC -c src/R_eval2051.c -o build\temp. win32-2.5\Release\src\r_eval2051.o c:/python25/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:944: w arning: '_import_array' defined but not used C:\mingw\bin\gcc.exe -mcygwin -mdll -O -Wall -DWITH_NUMERIC=3 -DPY_ARRAY_TYPES_P REFIX=PyArray_ -DRPY_SHNAME=_rpy2051 -DINIT_RPY=init_rpy2051 -UPRE_2_2 "-IC:\Pro gram Files\R\R-2.5.1\include" -Isrc -Ic:\python25\lib\site-packages\numpy\core\i nclude -Ic:\python25\include -Ic:\python25\PC -c src/io2051.c -o build\temp.win3 2-2.5\Release\src\io2051.o c:/python25/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:944: w arning: '_import_array' defined but not used writing build\temp.win32-2.5\Release\src\_rpy2051.def C:\mingw\bin\gcc.exe -mcygwin -shared -s build\temp.win32-2.5\Release\src\rpymod ule2051.o build\temp.win32-2.5\Release\src\r_eval2051.o build\temp.win32-2.5\Rel ease\src\io2051.o build\temp.win32-2.5\Release\src\setenv.o build\temp.win32-2.5 \Release\src\_rpy2051.def "-LC:\Program Files\R\R-2.5.1\bin" "-LC:\Program Files \R\R-2.5.1\lib" -Lc:\python25\libs -Lc:\python25\PCBuild -lR -lpython25 -lmsvcr7 1 -o build\lib.win32-2.5\_rpy2051.pyd When I try to import rpy i get the following messages: >>> from rpy import * RHOME= C:\Program Files\R\R-2.4.1 RVERSION= 2.4.1 RVER= 2041 RUSER= U:\ Loading the R DLL C:\Program Files\R\R-2.4.1\bin\R.dll .. Done. Loading Rpy version 2041 .. and then Python just quits. The problem arises when importing _rpy2041.pyd error signature AppName: python.exe AppVer: 0.0.0.0 ModName: msvcr71.dll ModVer: 7.10.6030.0 Offset: 00003bec The 2 questions I have are: - how can I solve this problem? - of is there someone with a working _rpy2041.pyd or _rpy2051.pyd file? ---------------------------------------------------------------------- >Comment By: Gregory Warnes (warnes) Date: 2007-10-17 22:03 Message: Logged In: YES user_id=9316 Originator: NO This should be fixed in the latest SVN version. Please give it a try. ---------------------------------------------------------------------- Comment By: Grzegorz Marcin Koczyk (gkoczyk) Date: 2007-09-04 12:28 Message: Logged In: YES user_id=752997 Originator: NO Same problem occurs on Vista. Older rpy1.0-RC2 works, but RC3 quits unexpectedly. ---------------------------------------------------------------------- Comment By: Reinder (rbrolsma) Date: 2007-08-27 08:05 Message: Logged In: YES user_id=1869386 Originator: YES I tried the new compiled version on WinXP. Unfortunately I still encounter the same problem. ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=453021&aid=1776119&group_id=48422 ------------------------------------------------------------------------- This SF.net email is sponsored by: Splunk Inc. Still grepping through log files to find problems? Stop. Now Search log events and configuration files using AJAX and a browser. Download your FREE copy of Splunk now >> http://get.splunk.com/ _______________________________________________ rpy-list mailing list rpy-list@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rpy-list
