Glad the problem is solved. Thanks for the link. Including something like
this in the docs would be a good idea.
-greg
On Thursday, September 12, 2013, Michał Nowotka wrote:
> Hi Greg,
>
> Problem solved! http://stackoverflow.com/a/18731255/940208
> Maybe setting LD_RUN_PATH before compiling it's worth a paragraph in rdkit
> docs?
>
> Cheers,
> Michał
>
>
> On Wed, Sep 11, 2013 at 11:15 PM, greg landrum
> <[email protected]<javascript:_e({}, 'cvml', '[email protected]');>
> > wrote:
>
>> Hi Michal,
>>
>> This is, unfortunately, not easy.
>>
>> One solution to this (the one we use) is to modify the environment in the
>> script that invokes apache and set LD_LIBRARY_PATH there..
>>
>> Another easy one is to install the rdkit shared libraries into a
>> directory which is in the apache user's LD_LIBRARY_PATH, maybe
>> /user/local/lib?
>>
>> If you can't convince your sys admins to do either of these for you, then
>> you will have to figure out how to use the RPATH support that cmake has:
>> http://www.cmake.org/Wiki/CMake_RPATH_handling
>>
>> I am away from my computer until next week, so, I can't offer any real,
>> help aside from pointing at that page.
>>
>> Once I am back I will definitely spend some time on this to see if it is
>> possible to simplify the process.
>>
>> -greg
>>
>>
>> On Sep 11, 2013, at 2:51 AM, Michał Nowotka
>> <[email protected]<javascript:_e({}, 'cvml', '[email protected]');>>
>> wrote:
>>
>> I have some problems with configuring apache to use rdkit, this is
>> described in SO question:
>>
>>
>> http://stackoverflow.com/questions/2550504/setting-ld-library-path-in-apache-passenv-setenv-still-cant-find-library
>>
>> Any help would be appreciated!
>>
>> Regards,
>> Michał Nowotka
>>
>>
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