Yes, I mean even RDKit.
No, the trouble maker has exactly the same system. The only difference is
that in order to install my app on other machines I was using fabric and on
the problematic machines I just rsynced directories from working machines.
The only error in error_log is:
ImportError: libRDGeneral.so.1: cannot open shared object file: No
such file or directory
On Tue, Sep 10, 2013 at 9:47 PM, Markus Sitzmann <[email protected]>wrote:
> **
> So you mean, you have even RDKit running with this setup on other machines
> or just the other libraries.
>
> If "other machines" vs the trouble maker machine includes a change from
> RH5
> to RH6 than indeed I would suspect SELinux as Igor suggested. Don't ask me
> for a solution except for switching it off.
>
> Is there anything (else) in /var/log/httpd/error_log?
>
> Markus
>
> On Tue, 10 Sep 2013 15:36:27 -0400, Michał Nowotka <[email protected]>
> wrote:
>
> Yes, I can. What is more important I successfully managed to run other
> libraries with extensions in C (indigo toolkit, cx_Oracle). What is even
> more important the same configuration (at least it seems to be the same)
> works on other machines. Unfortunately I don't know how to debug to find
> source of my problems....
>
>
> On Tue, Sep 10, 2013 at 9:32 PM, Markus Sitzmann
> <[email protected]>wrote:
>
>> How far is your setup working so far? Can you already run python scripts
>> via mod_wsgi without importing rdkit?
>>
>>
>>
>>
>> On Tue, 10 Sep 2013 15:29:07 -0400, Michał Nowotka <[email protected]>
>> wrote:
>>
>> Yes: python, mod_wsgi, vitualenv, RHEL
>>
>>
>> On Tue, Sep 10, 2013 at 9:22 PM, Markus Sitzmann
>> <[email protected]>wrote:
>>
>>> Are you trying to use it with python/mod_wsgi? Your description so far
>>> is a bit vague :-)
>>>
>>> Markus
>>>
>>> On Tue, 10 Sep 2013 15:00:55 -0400, Michał Nowotka <[email protected]>
>>> wrote:
>>>
>>> Thanks for advices. Unfortunately I can't do anything system-wide as I
>>> don't have administrator privileges on the server. Than also means I can't
>>> switch selinux.
>>>
>>>
>>> On Tue, Sep 10, 2013 at 7:59 PM, Igor Filippov <
>>> [email protected]> wrote:
>>>
>>>> Some kind of an answer seems to be already given at Stackoverflow.
>>>> I would add two comments:
>>>> 1) Unless there are some specific problems with this you can add new
>>>> library system-wide through ld.so.conf
>>>> 2) You did not mention what your log files say but I would experiment
>>>> with Selinux switched off.
>>>>
>>>>
>>>>
>>>> On Tue, Sep 10, 2013 at 1:51 PM, Michał Nowotka <[email protected]>wrote:
>>>>
>>>>> I have some problems with configuring apache to use rdkit, this is
>>>>> described in SO question:
>>>>>
>>>>>
>>>>> http://stackoverflow.com/questions/2550504/setting-ld-library-path-in-apache-passenv-setenv-still-cant-find-library
>>>>>
>>>>> Any help would be appreciated!
>>>>>
>>>>> Regards,
>>>>> Michał Nowotka
>>>>>
>>>>>
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>>>>>
>>>>
>>>
>>>
>>>
>>>
>>
>>
>>
>>
>
>
>
>
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