As I said, in other question, I don't have provilidges to edit
postgresql.conf, so I'm looking for other solution.
And I'm not sure if the settings are issue here, as this query works
perfectly from pgAdminIII.
On Thu, Jul 11, 2013 at 5:50 PM, Rodrigo Ochoa <[email protected]>wrote:
> Hi Michal
>
> This a problem that can be solved through two ways:
>
> 1) Execute a single query like this before calling the
> rdkit.tanimoto_threshold:
>
> select 'c1ccccc1O'::mol;
>
> Then you can set a tanimoto threshold without problems. Is an internal
> bug, that can be solved according to the second way
>
> 2) You can add this line to the postgressql.conf file:
>
> shared_preload_libraries = 'rdkit'
>
> This is a link with the explanation:
> https://code.google.com/p/rdkit/wiki/BuildingTheCartridge
>
> I hope it helps
>
>
> On Thu, Jul 11, 2013 at 5:52 PM, Michał Nowotka <[email protected]> wrote:
>
>> Is is possible to specify similarity threshold for single query instead
>> of relying on global "rdkit.tanimoto_threshold" which I'm having problems
>> with?
>>
>> It would be much more intuitive to do so, otherwise I need to surround my
>> similarity search SQL with statements changing global threshold and
>> restoring it afterwards.
>>
>> Regards,
>>
>> Michał Nowotka
>>
>>
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>
>
> --
>
> ----------------------------------------------------------------------------------------------------
> *Rodrigo Alonso Ochoa Deossa
> **Bioengineer - MSc(c) Basic Biomedical Sciences*
> *University of Antioquia - SIU - PECET
> Medellín, Colombia
> **e: [email protected]*
> *t: +57-4-2196622*
> *m: +57-3004505174*
>
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