Merci Greg,
This needs an update then:
https://github.com/rdkit/rdkit/blob/master/Docs/Book/Install.rst
"Ubuntu 12.04 and later"
On 15 May 2013 04:49, Greg Landrum <[email protected]> wrote:
> Hi JP,
>
>
> On Tue, May 14, 2013 at 3:43 PM, JP <[email protected]> wrote:
>
>> On:
>>
>> jpebe@ned:~/dphil/ligity_vs_es_tests$ lsb_release -a
>> No LSB modules are available.
>> Distributor ID: Ubuntu
>> Description: Ubuntu 12.04.2 LTS
>> Release: 12.04
>> Codename: precise
>>
>> Fresh rdkit install via:
>>
>> sudo apt-get install python-rdkit librdkit1 rdkit-data
>>
>> Gives:
>>
>> >>> import rdkit
>> >>> from rdkit import Chem
>> >>> s = Chem.ForwardSDMolSupplier('test.sdf')
>> Traceback (most recent call last):
>> File "<stdin>", line 1, in <module>
>> AttributeError: 'module' object has no attribute 'ForwardSDMolSupplier'
>> >>>
>>
>> Any ideas?
>>
>
> The version of the RDKit that is available via deb in ubuntu 12.04 is
> v2011.06. The ForwardSDMolSupplier was not added to the python wrappers
> until v2011.12.1. ubuntu 12.10 includes v2012.03, so it should have
> ForwardSDMolSupplier.
>
> I don't believe that there's a backport version of the v2012.03 package
> available, so, unfortunately, on the current LTS version of Ubuntu (12.04),
> you will need to install from source to get the functionality.
>
> -greg
>
>
>
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