Dear all.
I tried to build the postgresql cartridge. (=>
http://code.google.com/p/rdkit/wiki/BuildingTheCartridge)
Os X 10.7.5, RDKit ver 2012_12_1, and PostgreSQL ver 9.1.3
I could not build the cartridge.
I got following error messages.
> cd $RDBASE/Code/PgSQL/rdkit
Then,
> make
g++ -I/opt/local/include -02 -Wall -Wmissing-prototypes -Wpointer-arith
-Wdeclaration-after-statement -Wendif-labels -Wformat-security
-fno-strict-aliasing -fwrapv -bundle -multiply_defined suppress -o
rdkit.so rdkit_io.o mol_op.o bfp_op.o sfp_op.o rdkit_gist.o low_gist.o
guc.o cache.o adapter.o -L/usr/local/pgsql/lib -Wl,-dead_strip_dylibs
-L/Users/takayuki/Cheminfo/RDKit/RDKit_2012_12_1//lib
-Wl,-rpath,'/Users/takayuki/Cheminfo/RDKit/RDKit_2012_12_1//lib'
-lChemTransforms -lFileParsers -lSmilesParse -lFingerprints -lSubgraphs
-lSubstructMatch -lDescriptors -lPartialCharges -lGraphMol -lDataStructs
-lRDGeometryLib -lRDGeneral -pthread -bundle_loader
/usr/local/pgsql/bin/postgres
Undefined symbols for architecture x86_64:
"_DirectFunctionCall1", referenced from:
_bfp_in in rdkit_io.o
_bfp_out in rdkit_io.o
_sfp_in in rdkit_io.o
_sfp_out in rdkit_io.o
ld: symbol(s) not found for architecture x86_64
collect2: ld returned 1 exit status
make: *** [rdkit.so] Error 1
Any advice or information you could provide would be greatly appreciated.
Sincerely
Takayuki.
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