On Mon, May 7, 2012 at 7:05 PM, Igor Filippov <[email protected]> wrote:
>
>> Here's the example output:
>>
>>
>>         *** Vote Results ***
>> misclassified: 93/242 (%38.43)  93/242 (%38.43)
>>
> Why the same set of numbers is printed twice?

If you do the predictions with a confidence threshold the two numbers
will be different. One will then be "accuracy relative to the
predictions made" while the other is "accuracy relative to the whole
data set"

>
>> average correct confidence:    0.8520
>> average incorrect confidence:  0.7673
>>
>>         Results Table:
>>
>>           72      61      |  68.57
>>           32      77      |  55.40
>>      ------- -------
>>        69.23   55.80
>>
>
> If I try to compute percentages I'm getting for example
> 72/(72+61) = 54.1%  not 68.57% or any other percentage I see there?
> However 72/(72+32) = 69.23% just as it should...

looks like that's a bug.

FYI: I've been spending some time recently looking at scikit-learn and
have been quite impressed... there's a bit of writeup here:
http://code.google.com/p/rdkit/wiki/WorkingWithSciKitLearn
It's definitely worth taking a look at.

-greg

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