Is your GCC version 3.4.3? If so, this is a known GCC bug -
http://gcc.gnu.org/bugzilla/show_bug.cgi?id=17327
Greg is correct. A newer version of GCC will fix the problem.
-Kirk
On Jun 4, 2010 10:10pm, Greg Landrum <[email protected]> wrote:
A followup,
On Thu, Jun 3, 2010 at 6:39 AM, Greg Landrum [email protected]>
wrote:
>
> On Wed, Jun 2, 2010 at 11:51 PM, Komath Damodaran [email protected]>
wrote:
>> Hi,
>> I am trying to compile RDKit_Q42009_1 on a Linux box. I have installed
>> Python2.6.5 and boost_1_43_0.
>>
>> The compilation crashes at FragCatGenerator.cpp with the following
error
>> message:
>> ---------------------------------------------------------
>> Building CXX object
>>
Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o
>> /usr/local/boost_1_43_0/include/boost/graph/named_graph.hpp:479:
sorry, not
>> implemented: use of `enumeral_type' in template type unification
>> make[2]: ***
>>
[Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o]
>> Error 1
>> make[1]: *** [Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/all]
>> Error 2
>> make: *** [all] Error 2
>> -------------------------------------------------
>
> I haven't tried boost 1.43 yet, so I haven't had a chance to
> encounter/work around this particular problem. I will take a look
> sometime in the next few days and see what I can do here.
This morning I successfully built and tested the RDKit under linux
using boost 1.43. This was using a recent version of g++ (v4.4.3)
under ubuntu linux v10.04.
I think this indicates pretty strongly that the build problems you're
experiencing are due to your compiler version.
Best Regards,
-greg
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