Simon, I'm curious how you produced that log. It's not the output from installing the port with the debug flag (i.e., -d), right? I'm curious to take a look at mine for something specific.
-Jonathan ------------------------------------------------------------------------- J.P. Olmsted 029 Corwin (Office) 130 Corwin Hall (Mail) Politics Department Princeton University Princeton, NJ 08544 t: 609.258.6202 f: 609.258.1110 jolms...@princeton.edu http://about.me/olmjo ------------------------------------------------------------------------- On Thu, Sep 12, 2013 at 2:18 PM, Simon Zehnder <szehn...@uni-bonn.de> wrote: > Romain, Jonathan, > > an update on the error I reported: This was due to some gettext failure in > the configuration of the R build on the Mac. I had to use the configure > options --with-included-gettext and everything worked after installation. > For a config.log if interested see here: > https://gist.github.com/anonymous/6541684. > > Thanks again for your quick help! > > > Best > > Simon > > On Sep 12, 2013, at 5:54 PM, Simon Zehnder <szehn...@uni-bonn.de> wrote: > > > Romain, Jonathan, > > > > many thanks for the quick response. This is actually very good to know, > that the -lintl is not in there usually. What I will do is to recompile my > R from sources - but this time without the option > --with-valgrind-instrumentation. Hopefully this is the source of error. > > > > Coming back to this later with hopefully some positive results. > > > > Best > > > > Simon > > > > On Sep 12, 2013, at 5:47 PM, Jonathan Olmsted <jolms...@princeton.edu> > wrote: > > > >> Any idea where that is coming from? It isn't coming from the Rcpp > Makevars or from a default Macports installation (as best as I can tell). I > just did an clean install of R from a clean Macports and then installed > Rcpp from within R. > >> > >> g++ -dynamiclib -Wl,-headerpad_max_install_names -undefined > dynamic_lookup -single_module -multiply_defined suppress -L/opt/local/lib > -Wl,-headerpad_max_install_names -arch x86_64 -o Rcpp.so Date.o Module.o > Rcpp_init.o Timer.o api.o attributes.o barrier.o exceptions.o > -F/opt/local/Library/Frameworks/R.framework/.. -framework R -Wl,-framework > -Wl,CoreFoundation > >> g++ -o libRcpp.dylib Date.o Module.o Rcpp_init.o Timer.o api.o > attributes.o barrier.o exceptions.o -dynamiclib > -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module > -multiply_defined suppress -F/opt/local/Library/Frameworks/R.framework/.. > -framework R -Wl,-framework -Wl,CoreFoundation > >> ar qc libRcpp.a Date.o Module.o Rcpp_init.o Timer.o api.o attributes.o > barrier.o exceptions.o > >> > >> > >> > >> > >> > ------------------------------------------------------------------------- > >> J.P. Olmsted > >> > >> 029 Corwin (Office) > >> 130 Corwin Hall (Mail) > >> > >> Politics Department > >> Princeton University > >> Princeton, NJ 08544 > >> > >> > >> t: 609.258.6202 > >> f: 609.258.1110 > >> jolms...@princeton.edu > >> http://about.me/olmjo > >> > ------------------------------------------------------------------------- > >> > >> > >> On Thu, Sep 12, 2013 at 10:28 AM, Simon Zehnder <szehn...@uni-bonn.de> > wrote: > >> Dear Rcpp-Users and Rcpp-Devels, > >> > >> I had to reinstall my system lately and compiled R-3.0.1. I installed > several packages and all installations went well. Then I tried to install > Rcpp 0.10.4. and I got: > >> > >> R CMD INSTALL Rcpp > >> * installing to library ‘/Users/simonzehnder/Library/R/3.0/library’ > >> * installing *source* package ‘Rcpp’ ... > >> ** package ‘Rcpp’ successfully unpacked and MD5 sums checked > >> ** libs > >> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG > -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c Date.cpp -o > Date.o > >> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG > -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c Module.cpp -o > Module.o > >> gcc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include > -DNDEBUG -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c > Rcpp_init.c -o Rcpp_init.o > >> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG > -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c Timer.cpp -o > Timer.o > >> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG > -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c api.cpp -o > api.o > >> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG > -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c attributes.cpp > -o attributes.o > >> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG > -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c barrier.cpp -o > barrier.o > >> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG > -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c exceptions.cpp > -o exceptions.o > >> g++ -dynamiclib -Wl,-headerpad_max_install_names -undefined > dynamic_lookup -single_module -multiply_defined suppress -L/opt/local/lib > -o Rcpp.so Date.o Module.o Rcpp_init.o Timer.o api.o attributes.o barrier.o > exceptions.o -F/Library/Frameworks/R.framework/.. -framework R -lintl > -Wl,-framework -Wl,CoreFoundation > >> g++ -o libRcpp.dylib Date.o Module.o Rcpp_init.o Timer.o api.o > attributes.o barrier.o exceptions.o -dynamiclib > -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module > -multiply_defined suppress -F/Library/Frameworks/R.framework/.. > -framework R -lintl -Wl,-framework -Wl,CoreFoundation > >> ld: library not found for -lintl > >> collect2: error: ld returned 1 exit status > >> make: *** [libRcpp] Error 1 > >> ERROR: compilation failed for package ‘Rcpp’ > >> * removing ‘/Users/simonzehnder/Library/R/3.0/library/Rcpp’ > >> > >> What is the intl library and what could be the error. > >> > >> My System: Mac OS X Mountain Lion 10.8.4, Macports gcc48 Compiler > >> > >> > >> Best > >> > >> Simon > >> _______________________________________________ > >> Rcpp-devel mailing list > >> Rcpp-devel@lists.r-forge.r-project.org > >> https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcpp-devel > >> > > > > _______________________________________________ > > Rcpp-devel mailing list > > Rcpp-devel@lists.r-forge.r-project.org > > https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcpp-devel > >
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