Hi Roger, I'm not aware of any existing solution. Could you send around a small example of the data format of an output sampled ancestor tree from BEAST or MrBayes? Are they just typical Newick/NEXUS format with ancestors indicated tipis with zero-length branches or something more complicated?
Remarkably I've not looked at the formatting of one, but obviously plotting SA trees is something the community will need in the near future. Cheers, -Dave On Tue, Dec 8, 2015 at 5:46 AM, Roger Close <roger.cl...@gmail.com> wrote: > Hi all, > > Does anyone know of a way to plot sampled-ancestor trees in R such that > ancestors lie on branches, rather than being zero-length terminals that > follow a bifurcation? > > Many thanks, > Roger > > --- > Roger Close, Postdoctoral Research Associate > Department of Earth Sciences, Oxford University > South Parks Road > Oxford OX1 3AN > United Kingdom > > [[alternative HTML version deleted]] > > _______________________________________________ > R-sig-phylo mailing list - R-sig-phylo@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-phylo > Searchable archive at http://www.mail-archive.com/r-sig-phylo@r-project.org/ -- David W. Bapst, PhD Adjunct Asst. Professor, Geology and Geol. Eng. South Dakota School of Mines and Technology 501 E. St. Joseph Rapid City, SD 57701 http://webpages.sdsmt.edu/~dbapst/ http://cran.r-project.org/web/packages/paleotree/index.html _______________________________________________ R-sig-phylo mailing list - R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo Searchable archive at http://www.mail-archive.com/r-sig-phylo@r-project.org/
