sorry, I just realized there was a typo in my previous email. To be
able to use the vignette you need to specify install_github that the
vignette needs to be build. So the first set of instructions from the
initial email should be:
install.packages(c("devtools", "rncl"))
devtools::install_github("fmichonneau/rotl", build_vignette=TRUE)
Thanks,
-- François
On Thu, Jun 18, 2015 at 10:18 AM, François Michonneau
<[email protected]> wrote:
> Hello all,
>
> The Open Tree of Life project (https://tree.opentreeoflife.org/)
> aims at synthesizing current knowledge of the tree of life by
> combining taxonomic information and published studies. The project
> provides APIs that allow users to interact with the services
> associated with the project. For instance, it can retrieve the
> phylogenetic tree for a given set of taxa.
>
> With David Winter and Joseph Brown, we have written an R package
> that interacts with the APIs to work with the trees and the other
> services they provide. We are almost ready to submit to CRAN, but
> before doing so I'd greatly appreciate feedback from users willing to
> give it a try.
>
> To install it, type:
>
> install.packages(c("devtools", "rncl"))
> devtools::install_github("fmichonneau/rotl")
>
> To get started I encourage you to read the vignette:
>
> library(rotl)
> vignette("how-to-use-rotl", package = "rotl")
>
> Please send any feedback to me directly by email, or preferably by
> opening an issue on GitHub: https://github.com/fmichonneau/rotl/issues
>
> Thanks!
> -- François
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