Hi Spencer, I don't see a response to this, but I am too seeing this on my M3 Macbook Air.
It looks to me like this is update.packages() looking at whether a package is outdated but then downloading the latest Mac binary. I don't know if this is because I've not got my system set up to build from sources or not (I mostly use the binaries but I can build packages by hand so *shrug* - I'm very new to Macs). The packages this is affecting right now are all packages that got updated a day or two ago and for which the mac binaries are not yet available. All the best G On Thu, 14 Nov 2024 at 19:41, Spencer Graves <spencer.gra...@prodsyse.com> wrote: > Hello, All: > > > "update.packages()" now identifies 6 packages with updates but > re-downloads the old version. In the output copied below starting, "Thu > Nov 14 06:48:15 2024", it invited me to update curl, Ecfun, NLP, > packageRank, slam, and terra. I said yes to all. Then it reinstalled the > old version, not the new, for each. Then I repeated the procedure > starting "Thu Nov 14 06:48:33 2024", 28 seconds later, with the same > results. > > > I've noticed this problem roughly 2 days ago. At that time, it > downloaded several packages, some correctly but two (Ecfun and terra) > incorrectly, as here. This was shortly after I got your email saying, > "Your package Ecfun_0.3-6.tar.gz has been built for Windows and will be > published within 24 hours in the corresponding CRAN directory." > > > sessionInfo() is also provided below. > > > I asked Uwe Ligges, who suggested I "ask on a sig-mac mailing > list if > this is know (to Simon in particular)?" Uwe added, "I can only tell > about source packages (as used under Linux) and Windows binaries where > this should never happen." > > > What do you think? > > > Thanks, > Spencer Graves > > > p.s. I very much appreciate this great R community. People live better > the world over because of good statistical analyses that may not have > been done -- or done as well -- without R and CRAN. > > > *** DOCUMENTATION OF WHAT I SAW: > > > > date() > [1] "Thu Nov 14 06:48:15 2024" > > update.packages() > curl : > Version 6.0.0 installed in > /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library > Version 6.0.1 available at https://cran.rstudio.com > Update? (Yes/no/cancel) y > Ecfun : > Version 0.3-2 installed in > /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library > Version 0.3-6 available at https://cran.rstudio.com > Update? (Yes/no/cancel) y > NLP : > Version 0.3-0 installed in > /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library > Version 0.3-1 available at https://cran.rstudio.com > Update? (Yes/no/cancel) y > packageRank : > Version 0.9.3 installed in > /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library > Version 0.9.4 available at https://cran.rstudio.com > Update? (Yes/no/cancel) y > slam : > Version 0.1-54 installed in > /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library > Version 0.1-55 available at https://cran.rstudio.com > Update? (Yes/no/cancel) y > terra : > Version 1.7-78 installed in > /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library > Version 1.7-83 available at https://cran.rstudio.com > Update? (Yes/no/cancel) y > trying URL > ' > https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.4/curl_6.0.0.tgz > ' > Content type 'application/x-gzip' length 832416 bytes (812 KB) > ================================================== > downloaded 812 KB > > trying URL > ' > https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.4/Ecfun_0.3-2.tgz > ' > Content type 'application/x-gzip' length 1245104 bytes (1.2 MB) > ================================================== > downloaded 1.2 MB > > trying URL > ' > https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.4/NLP_0.3-0.tgz > ' > Content type 'application/x-gzip' length 396405 bytes (387 KB) > ================================================== > downloaded 387 KB > > trying URL > ' > https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.4/packageRank_0.9.3.tgz > ' > Content type 'application/x-gzip' length 3504704 bytes (3.3 MB) > ================================================== > downloaded 3.3 MB > > trying URL > ' > https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.4/slam_0.1-54.tgz > ' > Content type 'application/x-gzip' length 212778 bytes (207 KB) > ================================================== > downloaded 207 KB > > trying URL > ' > https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.4/terra_1.7-78.tgz > ' > Content type 'application/x-gzip' length 97585776 bytes (93.1 MB) > ================================================== > downloaded 93.1 MB > > > The downloaded binary packages are in > > /var/folders/2n/zqk768wj3818l8x2wttbc5kw0000gn/T//Rtmp7DqHrd/downloaded_packages > > > > > > date() > [1] "Thu Nov 14 06:48:33 2024" > > update.packages() > curl : > Version 6.0.0 installed in > /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library > Version 6.0.1 available at https://cran.rstudio.com > Update? (Yes/no/cancel) y > Ecfun : > Version 0.3-2 installed in > /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library > Version 0.3-6 available at https://cran.rstudio.com > Update? (Yes/no/cancel) y > NLP : > Version 0.3-0 installed in > /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library > Version 0.3-1 available at https://cran.rstudio.com > Update? (Yes/no/cancel) y > packageRank : > Version 0.9.3 installed in > /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library > Version 0.9.4 available at https://cran.rstudio.com > Update? (Yes/no/cancel) y > slam : > Version 0.1-54 installed in > /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library > Version 0.1-55 available at https://cran.rstudio.com > Update? (Yes/no/cancel) y > terra : > Version 1.7-78 installed in > /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library > Version 1.7-83 available at https://cran.rstudio.com > Update? (Yes/no/cancel) y > trying URL > ' > https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.4/curl_6.0.0.tgz > ' > Content type 'application/x-gzip' length 832416 bytes (812 KB) > ================================================== > downloaded 812 KB > > trying URL > ' > https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.4/Ecfun_0.3-2.tgz > ' > Content type 'application/x-gzip' length 1245104 bytes (1.2 MB) > ================================================== > downloaded 1.2 MB > > trying URL > ' > https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.4/NLP_0.3-0.tgz > ' > Content type 'application/x-gzip' length 396405 bytes (387 KB) > ================================================== > downloaded 387 KB > > trying URL > ' > https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.4/packageRank_0.9.3.tgz > ' > Content type 'application/x-gzip' length 3504704 bytes (3.3 MB) > ================================================== > downloaded 3.3 MB > > trying URL > ' > https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.4/slam_0.1-54.tgz > ' > Content type 'application/x-gzip' length 212778 bytes (207 KB) > ================================================== > downloaded 207 KB > > trying URL > ' > https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.4/terra_1.7-78.tgz > ' > Content type 'application/x-gzip' length 97585776 bytes (93.1 MB) > ================================================== > downloaded 93.1 MB > > > The downloaded binary packages are in > > /var/folders/2n/zqk768wj3818l8x2wttbc5kw0000gn/T//Rtmp7DqHrd/downloaded_packages > > > > > > > > sessionInfo() > R version 4.4.2 (2024-10-31) > Platform: aarch64-apple-darwin20 > Running under: macOS Sequoia 15.0.1 > > Matrix products: default > BLAS: > /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib > > > LAPACK: > /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/lib/libRlapack.dylib; > > LAPACK version 3.12.0 > > locale: > [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 > > time zone: America/Chicago > tzcode source: internal > > attached base packages: > [1] stats graphics grDevices utils datasets > [6] methods base > > loaded via a namespace (and not attached): > [1] compiler_4.4.2 tools_4.4.2 > > > On 11/12/24 04:48, lig...@statistik.tu-dortmund.de wrote: > > Dear package maintainer, > > > > this notification has been generated automatically. > > Your package Ecfun_0.3-6.tar.gz has been built for Windows and > > will be published within 24 hours in the corresponding CRAN directory. > > R version 4.4.2 (2024-10-31 ucrt) > > > > All the best, > > Uwe Ligges > > (Maintainer of binary packages for Windows) > > > > _______________________________________________ > R-SIG-Mac mailing list > R-SIG-Mac@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-mac > -- Gavin Simpson, PhD [he/him/his] [tw] @ucfagls [OrciD] 0000-0002-9084-8413 [web] fromthebottomoftheheap.net • Assistant Professor • Department of Animal & Veterinary Sciences, Aarhus University • Adjunct Professor, Department of Biology, University of Regina. [[alternative HTML version deleted]] _______________________________________________ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
