It looks like you don’t have fortran. An installer can be obtained from https://mac.r-project.org/tools/
Ken > On 24 Apr 2023, at 7:05 am, varin sacha via R-SIG-Mac > <r-sig-mac@r-project.org> wrote: > > R-experts, > > What is going wrong? > > At the end of this page there is the installation command : > https://gitlab.science.ru.nl/gbucur/RUcausal/-/blob/master/README.Rmd > > Working with a MAC, I have tried to install the RUcausal library (copy and > paste the installation command). > > It is written that the package has been built on Linux using the GNU Compiler > Collection. To install the package, open an R instance and run: > install.packages('devtools') # required package > devtools::install_git('https://gitlab.science.ru.nl/gbucur/RUcausal') > > I get this error message : > > ERROR: package installation failed > Error: Failed to install 'RUcausal' from Git: > ! System command 'R' failed > 0d0bz2p4xg640000gn/T/RtmpMs1teQ/Rinst6453ee77bb8/RUcausal’ > > > > install.packages('devtools') # required package > --- Please select a CRAN mirror for use in this session --- > trying URL > 'https://stat.ethz.ch/CRAN/bin/macosx/big-sur-arm64/contrib/4.2/devtools_2.4.5.tgz' > Content type 'application/x-gzip' length 421790 bytes (411 KB) > ================================================== > downloaded 411 KB > > > The downloaded binary packages are in > > /var/folders/t_/myv0vvms11g40d0bz2p4xg640000gn/T//Rtmp7SUtUd/downloaded_packages >> devtools::install_git('https://gitlab.science.ru.nl/gbucur/RUcausal') > Downloading git repo https://gitlab.science.ru.nl/gbucur/RUcausal > '/usr/bin/git' clone --depth 1 --no-hardlinks > https://gitlab.science.ru.nl/gbucur/RUcausal > /var/folders/t_/myv0vvms11g40d0bz2p4xg640000gn/T//Rtmp7SUtUd/file61a2a8e336a > ── R CMD build > ────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────── > ─ installing the package to process help pages > -----------------------------------ges > ─ installing *source* package ‘RUcausal’ ... > ** using staged installation > ** libs > clang++ -arch arm64 -std=gnu++14 > -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG > -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/Rcpp/include' > > -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/RcppArmadillo/include' > -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -Wall > -pedantic -c RcppExports.cpp -o RcppExports.o > clang++ -arch arm64 -std=gnu++14 > -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG > -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/Rcpp/include' > > -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/RcppArmadillo/include' > -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -Wall > -pedantic -c compute_DAG_probabilities_BGe_fast.cpp -o > compute_DAG_probabilities_BGe_fast.o > clang++ -arch arm64 -std=gnu++14 -dynamiclib > -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module > -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib > -L/opt/R/arm64/lib -o RUcausal.so RcppExports.o > compute_DAG_probabilities_BGe_fast.o > -L/Library/Frameworks/R.framework/Resources/lib -lRlapack > -L/Library/Frameworks/R.framework/Resources/lib -lRblas > -L/opt/R/arm64/gfortran/lib/gcc/aarch64-apple-darwin20.6.0/12.0.1 > -L/opt/R/arm64/gfortran/lib -lgfortran -lemutls_w -lquadmath > -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework > -Wl,CoreFoundation > ld: warning: directory not found for option > '-L/opt/R/arm64/gfortran/lib/gcc/aarch64-apple-darwin20.6.0/12.0.1' > ld: warning: directory not found for option '-L/opt/R/arm64/gfortran/lib' > ld: library not found for -lgfortran > clang: error: linker command failed with exit code 1 (use -v to see > invocation) > make: *** [RUcausal.so] Error 1 > ERROR: compilation failed for package ‘RUcausal’ > ─ removing > ‘/private/var/folders/t_/myv0vvms11g40d0bz2p4xg640000gn/T/RtmpMs1teQ/Rinst6453ee77bb8/RUcausal’ > ----------------------------------- > ERROR: package installation failed > Error: Failed to install 'RUcausal' from Git: > ! System command 'R' failed > 0d0bz2p4xg640000gn/T/RtmpMs1teQ/Rinst6453ee77bb8/RUcausal’ > > > Envoyé de mon iPhone > _______________________________________________ > R-SIG-Mac mailing list > R-SIG-Mac@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-mac [[alternative HTML version deleted]] _______________________________________________ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
