On 04/04/2023 18:45, Tomas Kalibera wrote:
On 4/4/23 18:26, Jennifer Wokaty wrote:
Hi,
I tried installing the x86_64 alpha available today at
https://mac.r-project.org/big-sur-x86_64/R-4.3-branch/R-4.3-branch-x86_64.pkg; however, I'm getting the following error:
$ sudo installer -pkg R-4.3-branch-x86_64.pkg -target /
installer: Package name is R 4.3.0 for macOS (X86_64)
installer: Upgrading at base path /
installer: The upgrade was successful.
$ R
dyld: lazy symbol binding failed: Symbol not found: _timespec_get
Referenced from:
/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libR.dylib (which was built for Mac OS X 11.0)
Expected in: /usr/lib/libSystem.B.dylib
dyld: Symbol not found: _timespec_get
Referenced from:
/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libR.dylib (which was built for Mac OS X 11.0)
Expected in: /usr/lib/libSystem.B.dylib
Abort trap: 6
Is this a problem with the .pkg file?
Hi Jen,
could you please report your macOS version, e.g. via sessionInfo()? Is
it at least 11?
'they' probably cannot run R to run sessionInfo(). Use 'About this Mac'
from the Apple menu to find the version without R.
The header has
__API_AVAILABLE(macosx(10.15), ios(13.0), tvos(13.0), watchos(6.0))
int timespec_get(struct timespec *ts, int base);
which says timespec_get is available from macOS 10.15 (Catalina)
We have had trouble with this before: configure.ac says
## timespec_get is C11.
## macOS added timespec_get in 10.15 but used 10.15's SDK for 10.14
(Darwin 18)
and it skips detection for Darwin <= 18.
Tomas
Jennifer Wokaty (they/them)
Waldron Lab at CUNY SPH
Bioconductor Core Team--
Brian D. Ripley, rip...@stats.ox.ac.uk
Emeritus Professor of Applied Statistics, University of Oxford
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