Bill, to answer the general part of you question, there are quite a few packages that allow you to use your GPU. At the low level you can use OpenCL which allows you to write code directly on the GPU and turn it into R functions. At a higher level there are frameworks like Torch and Tensorflow that support GPUs and there are packages like keras or rTorch that provide interfaces to that, e.g. for machine learning models. All those support Apple silicon GPUs.
However, you mentioned bigCor which is orthogonal to that. There are papers (such as https://doi.org/10.1134/S1995080219050068 ) that describe some approaches to using GPUs to compute covariance matrices, but in general GPUs don't really give you a large benefit on their own since it is a lot more about memory management and using smart algorithms/data structures to reduce the necessary computation. You may have more luck asking in HPC forums about that since is not really Mac-specifc (and the answer may depend on what you are actually trying to do so may need more details). Cheers, Simon > On 22/02/2023, at 6:12 AM, William R Revelle <reve...@northwestern.edu> wrote: > > Dear R-Mac users. > > In trying to speed up a large correlation problem (600K subjects, 6k > variables,) which I can do using my bigCor function, I decided it was time > to learn how to use GPU on my Mac book with its M1 Max gpu. > > Having spent a day searching the web and trying various approaches, I give > up. > > Are there any packages I can use to do calculations on the GPU part of my Mac > using R? > > Thanks. > > Bill > > William Revelle personality-project.org/revelle.html > Professor personality-project.org > Department of Psychology www.wcas.northwestern.edu/psych/ > Northwestern University www.northwestern.edu/ > Use R for psychology personality-project.org/r > It is 90 seconds to midnight www.thebulletin.org > > _______________________________________________ > R-SIG-Mac mailing list > R-SIG-Mac@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-mac > _______________________________________________ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
