The question is why do you need to install from sources. Using a standard R install and then following the instructions at https://www.bioconductor.org/install/ and then use BiocManager::install(“affy”) It works for me. If it doesn’t for you, then you have done something to your installation. Life will be easier if you just use a standard installation.
Ken > On 13 Dec 2022, at 4:18 pm, Bowen Lai <bwlaisp...@163.com> wrote: > > R version: 4.2.2 > Arm64 with M1 SoC > > > my problem is totally same as this guy > https://support.bioconductor.org/p/9148182/ > so i search in Google and downlaod gfortan is neccessary. > Therefore, I have download ARM64 Macs: > gfortran-12.0.1-20220312-is-darwin20-arm64.tar.xz from > https://github.com/R-macos/gcc-darwin-arm64/releases/tag/R-4.2.0-release , > but i can't understand how to use gfortran in R to library package so the > problem is still unsolved. > > > > > In detail, i can't understand the following steps because i am a medical > student and know a little about professional CS. > > > > > "This binary installs into /opt/R/arm64/gfortran with an additional symlink > in /opt/R/arm64/bin/gfortran. To unpack use > > tar fxz gfortran-12.0.1-20220312-is-darwin20-arm64.tar.xz -C / > > > (prefix with sudo if you need admin permissions to write to /opt/R/arm64). To > use set > > export PATH=$PATH:/opt/R/arm64/gfortran/bin > > > In addition, /opt/R/arm64/gfortran/SDK has to point to your macOS SDK. The > binary above points to MacOSX11.sdk of Xcode Command Line Tools, but you may > need to change it to match your installation. We include a script > gfortran-update-sdk in the above tar ball that you can simply run (prefix > with sudo if you require admin permissions). > > This build has been configured with: > > ../gcc-darwin-arm64/configure --prefix=/opt/R/arm64/gfortran > --enable-languages=c,fortran \ > --with-gmp=/opt/R/arm64 --with-mpc=/opt/R/arm64 --with-mpfr=/opt/R/arm64 \ > --with-sysroot=/opt/R/arm64/gfortran/SDK" > Sincerely Yours > Bowen Lai > > > [[alternative HTML version deleted]] > > _______________________________________________ > R-SIG-Mac mailing list > R-SIG-Mac@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-mac _______________________________________________ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
