In MacOS 10.12.3 (Sierra), I can't update packages (though it worked on the
same computer in MacOS 10.11):
update.packages(
lib = lib <- .libPaths()[1],
pkgs = as.data.frame(installed.packages(lib),
stringsAsFactors=FALSE)$Package,
type = 'source')
Warning: unable to access index for repository
https://cloud.r-project.org/src/contrib:
cannot open the connection
Warning message:
In read.dcf(file = tmpf) :
cannot open compressed file '/tmp/RtmpS3f5mS/file959038dcc8eb', probable
reason 'No such file or directory'
---
My internet connection works fine; updating hasn't worked since I upgraded
MacOS to 10.12 from 10.11.
Confusingly, on a new MacBook Pro with 10.12.3 & R 3.3.3, updating works
without error. It feels as though something changed in the upgrade and now I
can't get to where I got before.
I'd appreciate help in resolving this.
---
Here's my configuration:
R version 3.3.3 (2017-03-06)
Platform: x86_64-apple-darwin13.4.0 (64-bit)
Running under: macOS Sierra 10.12.3
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets
[6] methods base
other attached packages:
[1] HANDLS_0.30 zUtil_0.94 sysMods_0.01
[4] foreign_0.8-67 car_2.1-3
loaded via a namespace (and not attached):
[1] Rcpp_0.12.8 maptools_0.8-40
[3] splines_3.3.3 MASS_7.3-45
[5] xtable_1.8-2 lattice_0.20-34
[7] minqa_1.2.4 plyr_1.8.4
[9] tools_3.3.3 nnet_7.3-12
[11] parallel_3.3.3 pbkrtest_0.4-6
[13] grid_3.3.3 nlme_3.1-131
[15] mgcv_1.8-17 quantreg_5.29
[17] DBI_0.5-1 MatrixModels_0.4-1
[19] lme4_1.1-12 Matrix_1.2-8
[21] nloptr_1.0.4 RSQLite_1.0.0
[23] gsubfn_0.6-6 Matching_4.9-2
[25] sp_1.2-3 SparseM_1.74
[27] chron_2.3-47 sqldf_0.4-10
[29] proto_1.0.0
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