Unfortunately, I already have XQuartz 2.7.4 and it gives the problem I reported. :-( Bryan
On May 29, 2013, at 7:16 PM, Robert J Goedman <[email protected]> wrote: > Great, like with Rcmdr, example(rgl) seems to work well. > > Repeatedly just 'example(plot3d)' and each time removing all rgl windows, > will lead to the same problem Bryan mentioned this morning. > > Rob J. Goedman > [email protected] > > > > > On May 29, 2013, at 3:57 PM, Roger Koenker <[email protected]> wrote: > >> Rob, >> >> Well, that was easy.... I upgraded to XQuartz 2.7.4 and now can run >> example(rgl) >> and also close the windows that are created. ;-). Many thanks! >> >> Roger >> >> url: www.econ.uiuc.edu/~roger Roger Koenker >> email [email protected] Department of Economics >> vox: 217-333-4558 University of Illinois >> fax: 217-244-6678 Urbana, IL 61801 >> >> On May 29, 2013, at 5:41 PM, Robert J Goedman wrote: >> >>> Roger, >>> >>> Not sure if that would fix it, but my system is the patched R.3.0.1, using >>> XQuartz 2.7.4 and a slightly newer version of rgl (rgl_0.93.940). >>> >>> Rob J. Goedman >>> [email protected] >>> >>> >>> >>> >>> On May 29, 2013, at 3:19 PM, Roger Koenker <[email protected]> wrote: >>> >>>> no, I never get a window.... I get an immediate segfault as soon as >>>> rgl.open() is called. >>>> >>>> >>>> url: www.econ.uiuc.edu/~roger Roger Koenker >>>> email [email protected] Department of Economics >>>> vox: 217-333-4558 University of Illinois >>>> fax: 217-244-6678 Urbana, IL 61801 >>>> >>>> On May 29, 2013, at 5:17 PM, Robert J Goedman wrote: >>>> >>>>> Roger, >>>>> >>>>> Do you ever see an rgl window pop-up? Just wondering if this is the same >>>>> issue. >>>>> >>>>> Rob J. Goedman >>>>> [email protected] >>>>> >>>>> >>>>> >>>>> >>>>> On May 29, 2013, at 2:49 PM, Roger Koenker <[email protected]> wrote: >>>>> >>>>>> I doubt that this is helpful, but I get: >>>>>> >>>>>>> rgl.open() >>>>>> Reading symbols for shared libraries . done >>>>>> >>>>>> Program received signal EXC_BAD_ACCESS, Could not access memory. >>>>>> Reason: KERN_INVALID_ADDRESS at address: 0x00000000000000e8 >>>>>> 0x0000000102e31a90 in gui::X11GUIFactory::createWindowImpl >>>>>> (this=0x1006871d0, >>>>>> window=0x7fff5fbfd330) at x11gui.cpp:612 >>>>>> 612 ::Window xparent = RootWindow(xdisplay, DefaultScreen(xdisplay)); >>>>>> (gdb) Quit >>>>>> >>>>>> url: www.econ.uiuc.edu/~roger Roger Koenker >>>>>> email [email protected] Department of Economics >>>>>> vox: 217-333-4558 University of Illinois >>>>>> fax: 217-244-6678 Urbana, IL 61801 >>>>>> >>>>>> On May 29, 2013, at 4:37 PM, Duncan Murdoch wrote: >>>>>> >>>>>>> On 13-05-29 11:19 AM, Bryan Hanson wrote: >>>>>>>> [originally on R-help, reposted here as the most relevent place] >>>>>>>> >>>>>>>> NOTE: problem is with R.app, looks OK on command line R >>>>>>>> >>>>>>>> This is really odd, and probably 100% local to me, but I'm at a loss >>>>>>>> as to a next step. >>>>>>>> >>>>>>>> After narrowing things down, here's how to reproduce: >>>>>>> >>>>>>> I don't see it, but it looks to me like it may be a timing problem. >>>>>>> I'm >>>>>>> guessing the destruction of the old window triggers events in the wrong >>>>>>> order and leaves rgl in an unstable state. Unfortunately, without >>>>>>> being >>>>>>> able to reproduce this, it looks really hard to track down. Can anyone >>>>>>> reproduce it while running in gdb or some other debugger? >>>>>>> >>>>>>> Duncan Murdoch >>>>>>> >>>>>>>> >>>>>>>> library("rgl") >>>>>>>> showSomething <- function() { >>>>>>>> open3d() >>>>>>>> points3d(rnorm(10),rnorm(10),rnorm(10)) >>>>>>>> axes3d() >>>>>>>> title3d('main','sub','xlab','ylab','zlab') >>>>>>>> } >>>>>>>> showSomething() # works as expected. >>>>>>>> # Close the current rgl window >>>>>>>> showSomething() # crashes R with the following report: >>>>>>>> >>>>>>>> *** caught segfault *** >>>>>>>> address 0x0, cause 'unknown' >>>>>>>> >>>>>>>> Traceback: >>>>>>>> 1: .C(rgl_dev_open, success = FALSE) >>>>>>>> 2: rgl.open() >>>>>>>> 3: open3d() >>>>>>>> 4: showSomething() >>>>>>>> >>>>>>>> This will probably work fine for any of you, it's so simple and >>>>>>>> fundamental. If I don't close the open rgl windows, it doesn't crash, >>>>>>>> and I can execute the function over and over successfully. And the >>>>>>>> same thing happens if I just do the commands inside the function >>>>>>>> individually. SessionInfo() below. >>>>>>>> >>>>>>>> Perhaps something is corrupt with my X11 window system? Thanks, Bryan >>>>>>>> >>>>>>>> R version 3.0.1 (2013-05-16) >>>>>>>> Platform: x86_64-apple-darwin10.8.0 (64-bit) >>>>>>>> >>>>>>>> locale: >>>>>>>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 >>>>>>>> >>>>>>>> attached base packages: >>>>>>>> [1] stats graphics grDevices utils datasets methods base >>>>>>>> >>>>>>>> other attached packages: >>>>>>>> [1] rgl_0.93.940 sos_1.3-5 brew_1.0-6 >>>>>>>> _______________________________________________ >>>>>>>> R-SIG-Mac mailing list >>>>>>>> [email protected] >>>>>>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac >>>>>>>> >>>>>>> >>>>>>> _______________________________________________ >>>>>>> R-SIG-Mac mailing list >>>>>>> [email protected] >>>>>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac >>>>>> >>>>>> _______________________________________________ >>>>>> R-SIG-Mac mailing list >>>>>> [email protected] >>>>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac >>>>> >>>> >>> >> > > > [[alternative HTML version deleted]] > > _______________________________________________ > R-SIG-Mac mailing list > [email protected] > https://stat.ethz.ch/mailman/listinfo/r-sig-mac _______________________________________________ R-SIG-Mac mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/r-sig-mac
