There are two problems:
1. CRAN is flagging two words as misspelled (even though they are valid
words in the OED, which is notoriously perscriptive).
2. "Writes to user library" --- This is the violation; an example in
your package is trying to write to a folder in the user's library.
If you look at the check page:
https://cran-archive.r-project.org/web/checks/2021/2021-01-13_check_results_ftrCOOL.html
(linked on the archived page), you see this:
> dir = tempdir()
> PredDisdir<-system.file("testForder",package="ftrCOOL")
>
> PredDisdir<-paste0(PredDisdir,"/Disdir/")
> ad1<-paste0(dir,"/disorderB.txt")
>
>
mat<-DisorderB(PredDisdir,binaryType="strBin",outFormat="txt",outputFileDist=ad1)
Warning in file(con, "w") :
cannot open file
'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ftrCOOL/extdata/tempTable.txt':
Read-only file system
Error in file(con, "w") : cannot open the connection
Calls: DisorderB -> readDisDir -> writeLines -> file
Execution halted
I think you can fix it by using tempfile() or tempdir() for the ad1 object.
Hope that helps,
Zhian
On 1/15/21 6:50 AM, sare ameri wrote:
Hi Everyone,
I hope this email finds you well.
I get errors when submitting my package. I didn't get the error when I
submitted the first version of my package.
Here is the error:
Package name: "ftrCOOL".
Error message:
Flavor: r-devel-windows-ix86+x86_64
Check: CRAN incoming feasibility, Result: NOTE
Maintainer: 'Sare Amerifar <sare.ameri...@gmail.com>'
New submission
Package was archived on CRAN
Possibly mis-spelled words in DESCRIPTION:
nucleotide (7:224)
peptide (7:239)
CRAN repository db overrides:
X-CRAN-Comment: Archived on 2021-01-13 for policy violation.
Writes to user library.
Flavor: r-devel-linux-x86_64-debian-gcc
Check: CRAN incoming feasibility, Result: NOTE
Maintainer: 'Sare Amerifar <sare.ameri...@gmail.com>'
New submission
Package was archived on CRAN
CRAN repository db overrides:
X-CRAN-Comment: Archived on 2021-01-13 for policy violation.
Writes to user library.
Thanks for any suggestion.
Have a nice day and Best,
Sareh Ameri Far
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