We are testing a very strict check setting, this will be reverted shortly.
Best,
Uwe Ligges
On 22.10.2015 15:31, Hadley Wickham wrote:
I've also seen some problems with missing testthat on
r-devel-windows-ix86+x86_64 - I'd say it's a temporary problem on the
CRAN end, and if your package is ok on win builder, you should be ok
to submit.
Hadley
On Wed, Oct 21, 2015 at 5:15 PM, Derek Ogle <do...@northland.edu> wrote:
I was hoping to submit a new version of my FSA package today when I noticed that the
current version on CRAN has an error on the CRAN checks page (which I don't believe was
there when I first submitted that version of the package). The error is detailed here
(https://cran.r-project.org/web/checks/check_results_FSA.html) and copied below. The
error is only for the "r-devel-windows-ix86+x86_64" flavor and appears to be
related to missing gdata and testthat packages. I looked at both the gdata and testthat
packages on CRAN and they have clean CRAN checks. I looked at a handful of other
packages that depend on gdata and testthat and they appear to have clean CRAN checks. I
checked the package on win-builder and it did not return any errors. Any pointers?
---------------------------------
Version: 0.8.1
Check: examples
Result: ERROR
Running examples in 'FSA-Ex.R' failed
The error most likely occurred in:
> ### Name: Subset
> ### Title: Subsets/filters a data frame and drops the unused levels.
> ### Aliases: Subset filterD
> ### Keywords: misc
>
> ### ** Examples
>
> ## The problem -- note use of unused level in the final table.
> levels(iris$Species)
[1] "setosa" "versicolor" "virginica"
> iris.set1 <- subset(iris,Species=="setosa" | Species=="versicolor")
> levels(iris.set1$Species)
[1] "setosa" "versicolor" "virginica"
> xtabs(~Species,data=iris)
Species
setosa versicolor virginica
50 50 50
>
> ## A simpler fix using Subset
> iris.set2 <- Subset(iris,Species=="setosa" | Species=="versicolor")
Loading required namespace: gdata
Failed with error: 'there is no package called 'gdata''
Error: 'filterD' requires the 'gdata' package to be installed!
Execution halted
Flavor: r-devel-windows-ix86+x86_64
Version: 0.8.1
Check: tests
Result: ERROR
Running the tests in 'tests/test-all.R' failed.
Last 13 lines of output:
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
Error in library(testthat) : there is no package called 'testthat'
Execution halted
Flavor: r-devel-windows-ix86+x86_64
Version: 0.8.1
---------------------------------
Dr. Derek H. Ogle
Professor of Mathematical Sciences & Natural Resources
Northland College
1411 Ellis Ave
Ashland, WI 54806
e-mail: do...@northland.edu
web: derekogle.com
fishr: derekogle.com/fishR/
Introduction to Fisheries Analysis with R book: derekogle/com/IFAR/
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