Oi! Could you guys move to r-devel? This has nothing to do with _package_ development.
-Peter D > On 21 Jul 2015, at 00:49 , MAURICIO ZAMBRANO BIGIARINI > <mauricio.zambr...@ufrontera.cl> wrote: > > ---------- Forwarded message ---------- > From: Dirk Eddelbuettel <e...@debian.org> > Date: 20 July 2015 at 19:21 > Subject: Re: [R-pkg-devel] Setting up R-devel in Linux Mint 17.1 64-bit > To: MAURICIO ZAMBRANO BIGIARINI <mauricio.zambr...@ufrontera.cl> > Cc: Dirk Eddelbuettel <e...@debian.org>, r-package-devel@r-project.org > > > > On 20 July 2015 at 18:56, MAURICIO ZAMBRANO BIGIARINI wrote: > | how can I be sure that I I enabled the shared library support ? > > edd@max:~/svn/r-devel$ ./configure --help | grep enable-R-sh > --enable-R-shlib build the shared/dynamic library 'libR' [no] > edd@max:~/svn/r-devel$ > > Make sure you set --enable-R-shlib. > > It is in the script which you linked to in your previous email. > > > I thought I did it already when running configure: > > ./configure --prefix=/usr/local/lib/R-devel --enable-R-shlib > --with-blas --with-lapack --with-readline > --without-recommended-packages > > > > I just tried to run again your script (mentioned in my previous > e-mail) from scratch and I'm still getting an error: > > R is now configured for x86_64-unknown-linux-gnu > > Source directory: . > Installation directory: /usr/local/lib/R-devel > > C compiler: ccache gcc -ggdb -pipe -std=gnu99 -Wall -pedantic > Fortran 77 compiler: ccache gfortran -g -O2 > > C++ compiler: ccache g++ -ggdb -pipe -Wall -pedantic > C++11 compiler: ccache g++ -std=c++11 -ggdb -pipe -Wall -pedantic > Fortran 90/95 compiler: ccache gfortran -g -O2 > Obj-C compiler: > > Interfaces supported: X11, tcltk > External libraries: readline, BLAS(generic), LAPACK(generic), curl > Additional capabilities: PNG, JPEG, TIFF, NLS, cairo, ICU > Options enabled: shared R library, R profiling > > Capabilities skipped: > Options not enabled: shared BLAS, memory profiling > > Recommended packages: no > > make[1]: Entering directory `/home/hzambran/SVN/R-devel/trunk/doc/manual' > make[1]: Nothing to be done for `front-matter'. > make[1]: Nothing to be done for `html-non-svn'. > make[1]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/doc/manual' > SVN-REVISION is unchanged > make[1]: Entering directory `/home/hzambran/SVN/R-devel/trunk/m4' > make[1]: Nothing to be done for `R'. > make[1]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/m4' > make[1]: Entering directory `/home/hzambran/SVN/R-devel/trunk/tools' > make[1]: Nothing to be done for `R'. > make[1]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/tools' > make[1]: Entering directory `/home/hzambran/SVN/R-devel/trunk/doc' > make[2]: Entering directory `/home/hzambran/SVN/R-devel/trunk/doc/html' > make[2]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/doc/html' > make[2]: Entering directory `/home/hzambran/SVN/R-devel/trunk/doc/manual' > make[2]: Nothing to be done for `R'. > make[2]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/doc/manual' > make[1]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/doc' > make[1]: Entering directory `/home/hzambran/SVN/R-devel/trunk/etc' > make[1]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/etc' > make[1]: Entering directory `/home/hzambran/SVN/R-devel/trunk/share' > make[1]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/share' > make[1]: Entering directory `/home/hzambran/SVN/R-devel/trunk/src' > make[2]: Entering directory `/home/hzambran/SVN/R-devel/trunk/src/scripts' > creating src/scripts/R.fe > make[3]: Entering directory `/home/hzambran/SVN/R-devel/trunk/src/scripts' > make[3]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/src/scripts' > make[2]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/src/scripts' > make[2]: Entering directory `/home/hzambran/SVN/R-devel/trunk/src/include' > config.status: creating src/include/config.h > config.status: src/include/config.h is unchanged > Rmath.h is unchanged > make[3]: Entering directory > `/home/hzambran/SVN/R-devel/trunk/src/include/R_ext' > make[3]: Nothing to be done for `R'. > make[3]: Leaving directory > `/home/hzambran/SVN/R-devel/trunk/src/include/R_ext' > make[2]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/src/include' > make[2]: Entering directory `/home/hzambran/SVN/R-devel/trunk/src/extra' > make[3]: Entering directory `/home/hzambran/SVN/R-devel/trunk/src/extra/tre' > make[4]: Entering directory `/home/hzambran/SVN/R-devel/trunk/src/extra/tre' > make[4]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/src/extra/tre' > make[4]: Entering directory `/home/hzambran/SVN/R-devel/trunk/src/extra/tre' > make[4]: `libtre.a' is up to date. > make[4]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/src/extra/tre' > make[3]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/src/extra/tre' > make[2]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/src/extra' > make[2]: Entering directory `/home/hzambran/SVN/R-devel/trunk/src/appl' > make[3]: Entering directory `/home/hzambran/SVN/R-devel/trunk/src/appl' > make[3]: `libappl.a' is up to date. > make[3]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/src/appl' > make[2]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/src/appl' > make[2]: Entering directory `/home/hzambran/SVN/R-devel/trunk/src/nmath' > make[3]: Entering directory `/home/hzambran/SVN/R-devel/trunk/src/nmath' > make[3]: `libnmath.a' is up to date. > make[3]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/src/nmath' > make[2]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/src/nmath' > make[2]: Entering directory `/home/hzambran/SVN/R-devel/trunk/src/unix' > make[3]: Entering directory `/home/hzambran/SVN/R-devel/trunk/src/unix' > make[3]: `libunix.a' is up to date. > make[3]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/src/unix' > make[3]: Entering directory `/home/hzambran/SVN/R-devel/trunk/src/unix' > ccache gcc -I. -I../../src/include -I../../src/include > -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -ggdb -pipe > -std=gnu99 -Wall -pedantic -L/usr/local/lib > -DR_HOME='"/home/hzambran/SVN/R-devel/trunk"' \ > -o Rscript ./Rscript.c > make[3]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/src/unix' > make[2]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/src/unix' > make[2]: Entering directory `/home/hzambran/SVN/R-devel/trunk/src/main' > make[3]: Entering directory `/home/hzambran/SVN/R-devel/trunk/src/main' > ccache gcc -shared -fopenmp -L/usr/local/lib -o libR.so > CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o > arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o > colors.o complex.o connections.o context.o cum.o dcf.o datetime.o > debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o > edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o > gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o > iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o > match.o memory.o names.o objects.o options.o paste.o platform.o plot.o > plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o > qsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o > scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o > subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o > util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o > xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` > ../extra/tre/libtre.a -lblas -lgfortran -lm -lquadmath -lreadline > -lpcre -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n > /usr/bin/ld: ../appl/dchdc.o: relocation R_X86_64_32 against `.rodata' > can not be used when making a shared object; recompile with -fPIC > ../appl/dchdc.o: error adding symbols: Bad value > collect2: error: ld returned 1 exit status > make[3]: *** [libR.so] Error 1 > make[3]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/src/main' > make[2]: *** [R] Error 2 > make[2]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/src/main' > make[1]: *** [R] Error 1 > make[1]: Leaving directory `/home/hzambran/SVN/R-devel/trunk/src' > make: *** [R] Error 1 > *** Done -- now run 'make install' > > > Any thoughts what I'm doing wrong ? > > > Mauricio > > ______________________________________________ > R-package-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-package-devel -- Peter Dalgaard, Professor, Center for Statistics, Copenhagen Business School Solbjerg Plads 3, 2000 Frederiksberg, Denmark Phone: (+45)38153501 Email: pd....@cbs.dk Priv: pda...@gmail.com ______________________________________________ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
